KG-LLM-MDQA
None
Stars: 290
This repository contains code and demo for Knowledge Graph Prompting for Multi-Document Question Answering. It includes modules for data collection, training DPR and MDR models, fine-tuning T5 and LLaMA, and reproducing KGP-LLM algorithm. The workflow involves document collection, knowledge graph construction, fine-tuning models, and reproducing main table results. The repository provides instructions for environment setup, folder architecture, and running different modules.
README:
This repository includes the code and demo of Knowledge Graph Prompting for Multi-Document Question Answering.
- Data-Collect: Codes for querying/collecting Documents based on QA datasets from existing literature. In addition, if you want to get access to the internally collected real-world document question-answering dataset, please refer paper PDFTriage: Question Answering over Long, Structured Documents for more details.
- DPR: Codes for training DPR, dense passage retrieval.
- MDR: Codes for training MDR, multi-hop dense passage retrieval.
- T5: Codes for instruction fine-tuning T5 based on reasoning data of HotpotQA and 2WikiMQA, the pre-trained T5 would be used as the agent for intelligent graph traversal.
- LLaMA: Codes for instruction fine-tuning LLaMA-7B based on reasoning data of HotpotQA and 2WikiMQA, the pre-trained LLaMA would be used as the agent for intelligent graph traversal.
- Pipeline: Codes for reproducing our KGP-LLM algorithm and other models in the main Table in the paper
All model checkpoints and real datasets are separately stored in the Dropbox! Due to limited number of times for the folder to be viewed by readers in a day, here I create another link sharing the folder, feel free to use this one as well
conda install -c anaconda python=3.8
pip install -r requirements.txt
pip install langchain
pip install nltk
pip install -U scikit-learn
pip install rank_bm25
pip install -U sentence-transformers
pip install -U pip setuptools wheel
pip install -U spacy
python -m spacy download en_core_web_lg
pip install torch-scatter
pip install Levenshtein
pip install openai==0.28
pip install torch torchvision torchaudio --index-url https://download.pytorch.org/whl/cu118
pip install sentencepiece
pip install transformers
We query Wikipedia based on the QA data from existing literature.
- Input: train/val.json
- Output: train/val/test_docs.json
cd Data-Collect/{dataset}
python3 process.py
We generate KG for each set of documents (paired with a question) using TF-IDF/KNN/TAGME of various densities. For the main Table experiment, we only use the graph constructed by TAGME with prior_prob 0.8.
- Input: train/val/test_docs.json
- Output: .pkl
cd Data-Collect
bash run_{dataset}.sh
We fine-tune the DPR model based on training queries and supporting passages and further use it for obtaining DPR baseline performance.
- HotpotQA: we already have well-curated negative samples in train/val_with_neg_v0 obtained here provided in the Dropbox.
- MuSiQue/Wiki2MQA/IIRC: we randomly sample negative passages before each training epoch.
cd DPR
bash run.sh
After run.sh, you will get model.pt and retrieved contexts for supporting facts for questions in test_docs.json.
We fine-tune the MDR model based on training queries and supporting passages and further use it for obtaining DPR baseline performance. Please note that we only fine-tune MDR for HotpotQA and MuSiQue as we have access to their multi-hop inference training data while for Wiki2MQA and IIRC, we directly use model.pt from HotpotQA to retrieve contexts.
- HotpotQA: Multi-hop training data obtained here, we already provided in the Dropbox.
- MuSiQue: Multi-hop training data obtained ourselves, we already provided in the Dropbox.
- IIRC/Wiki2MQA: We use model.pt from HotpotQA for retrieval.
cd MDR
bash run.sh
After run.sh, you will get model.pt and retrieved contexts for supporting facts for questions in test_docs.json.
See README.md in T5 Folder
See README.md in LLaMA Folder
After completing all the above steps, we need to put the testing documents, retrieved contexts from the model, and generated knowledge graph in the corresponding place. Then, we have everything ready for the main Table in the paper. Specifically, see README.md in Pipeline to configure the files.
- DPR: require DPR_context.json (get from following 3. DPR instruction)
- MDR: require MDR_context.json (get from following 4. MDR instruction)
- LLaMA: require open LLaMA API (open following 6. LLaMA instruction, ensure the port number is consistent, we use localhost with port number 5000 by default)
- T5: open T5 API (open following 5. T5 instruction, ensure the port number is consistent, we use localhost with port number 5000 by default)
- KGP w/o LLM: require the type of KG our LLM is traversing on (get from following 1.-2. instructions)
- KGP-T5/LLaMA/MDR: require KG file (get from following 1-2 instructions) and LLM API is open (5-6 instructions)
- KGNN: require passage embeddings for each passage in the documents for each testing question (obtained by running knn_emb.py)
Then run the following commands:
cd Pipeline
bash run_{dataset}.sh
[!important]
We use multi-parallel processing to call LLM to process each question for each set of documents, which would incur a large amount of consumption when calling with OpenAI API call, therefore, please adaptively change the number of CPUs when parallel calling API according to your budget.
For final evaluation the generated answer:
cd evaluation
jupyter notebook eval.ipynb
Run the corresponding kernels
For Tasks:
Click tags to check more tools for each tasksFor Jobs:
Alternative AI tools for KG-LLM-MDQA
Similar Open Source Tools
KG-LLM-MDQA
This repository contains code and demo for Knowledge Graph Prompting for Multi-Document Question Answering. It includes modules for data collection, training DPR and MDR models, fine-tuning T5 and LLaMA, and reproducing KGP-LLM algorithm. The workflow involves document collection, knowledge graph construction, fine-tuning models, and reproducing main table results. The repository provides instructions for environment setup, folder architecture, and running different modules.
Simplifine
Simplifine is an open-source library designed for easy LLM finetuning, enabling users to perform tasks such as supervised fine tuning, question-answer finetuning, contrastive loss for embedding tasks, multi-label classification finetuning, and more. It provides features like WandB logging, in-built evaluation tools, automated finetuning parameters, and state-of-the-art optimization techniques. The library offers bug fixes, new features, and documentation updates in its latest version. Users can install Simplifine via pip or directly from GitHub. The project welcomes contributors and provides comprehensive documentation and support for users.
eole
EOLE is an open language modeling toolkit based on PyTorch. It aims to provide a research-friendly approach with a comprehensive yet compact and modular codebase for experimenting with various types of language models. The toolkit includes features such as versatile training and inference, dynamic data transforms, comprehensive large language model support, advanced quantization, efficient finetuning, flexible inference, and tensor parallelism. EOLE is a work in progress with ongoing enhancements in configuration management, command line entry points, reproducible recipes, core API simplification, and plans for further simplification, refactoring, inference server development, additional recipes, documentation enhancement, test coverage improvement, logging enhancements, and broader model support.
comfyui_LLM_Polymath
LLM Polymath Chat Node is an advanced Chat Node for ComfyUI that integrates large language models to build text-driven applications and automate data processes, enhancing prompt responses by incorporating real-time web search, linked content extraction, and custom agent instructions. It supports both OpenAI’s GPT-like models and alternative models served via a local Ollama API. The core functionalities include Comfy Node Finder and Smart Assistant, along with additional agents like Flux Prompter, Custom Instructors, Python debugger, and scripter. The tool offers features for prompt processing, web search integration, model & API integration, custom instructions, image handling, logging & debugging, output compression, and more.
postgresml
PostgresML is a powerful Postgres extension that seamlessly combines data storage and machine learning inference within your database. It enables running machine learning and AI operations directly within PostgreSQL, leveraging GPU acceleration for faster computations, integrating state-of-the-art large language models, providing built-in functions for text processing, enabling efficient similarity search, offering diverse ML algorithms, ensuring high performance, scalability, and security, supporting a wide range of NLP tasks, and seamlessly integrating with existing PostgreSQL tools and client libraries.
kollektiv
Kollektiv is a Retrieval-Augmented Generation (RAG) system designed to enable users to chat with their favorite documentation easily. It aims to provide LLMs with access to the most up-to-date knowledge, reducing inaccuracies and improving productivity. The system utilizes intelligent web crawling, advanced document processing, vector search, multi-query expansion, smart re-ranking, AI-powered responses, and dynamic system prompts. The technical stack includes Python/FastAPI for backend, Supabase, ChromaDB, and Redis for storage, OpenAI and Anthropic Claude 3.5 Sonnet for AI/ML, and Chainlit for UI. Kollektiv is licensed under a modified version of the Apache License 2.0, allowing free use for non-commercial purposes.
open-webui-tools
Open WebUI Tools Collection is a set of tools for structured planning, arXiv paper search, Hugging Face text-to-image generation, prompt enhancement, and multi-model conversations. It enhances LLM interactions with academic research, image generation, and conversation management. Tools include arXiv Search Tool and Hugging Face Image Generator. Function Pipes like Planner Agent offer autonomous plan generation and execution. Filters like Prompt Enhancer improve prompt quality. Installation and configuration instructions are provided for each tool and pipe.
clearml-server
ClearML Server is a backend service infrastructure for ClearML, facilitating collaboration and experiment management. It includes a web app, RESTful API, and file server for storing images and models. Users can deploy ClearML Server using Docker, AWS EC2 AMI, or Kubernetes. The system design supports single IP or sub-domain configurations with specific open ports. ClearML-Agent Services container allows launching long-lasting jobs and various use cases like auto-scaler service, controllers, optimizer, and applications. Advanced functionality includes web login authentication and non-responsive experiments watchdog. Upgrading ClearML Server involves stopping containers, backing up data, downloading the latest docker-compose.yml file, configuring ClearML-Agent Services, and spinning up docker containers. Community support is available through ClearML FAQ, Stack Overflow, GitHub issues, and email contact.
ROSGPT_Vision
ROSGPT_Vision is a new robotic framework designed to command robots using only two prompts: a Visual Prompt for visual semantic features and an LLM Prompt to regulate robotic reactions. It is based on the Prompting Robotic Modalities (PRM) design pattern and is used to develop CarMate, a robotic application for monitoring driver distractions and providing real-time vocal notifications. The framework leverages state-of-the-art language models to facilitate advanced reasoning about image data and offers a unified platform for robots to perceive, interpret, and interact with visual data through natural language. LangChain is used for easy customization of prompts, and the implementation includes the CarMate application for driver monitoring and assistance.
llm-answer-engine
This repository contains the code and instructions needed to build a sophisticated answer engine that leverages the capabilities of Groq, Mistral AI's Mixtral, Langchain.JS, Brave Search, Serper API, and OpenAI. Designed to efficiently return sources, answers, images, videos, and follow-up questions based on user queries, this project is an ideal starting point for developers interested in natural language processing and search technologies.
greenmask
Greenmask is a powerful open-source utility designed for logical database backup dumping, anonymization, synthetic data generation, and restoration. It is highly customizable, stateless, and backward-compatible with existing PostgreSQL utilities. Greenmask supports advanced subset systems, deterministic transformers, dynamic parameters, transformation conditions, and more. It is cross-platform, database type safe, extensible, and supports parallel execution and various storage options. Ideal for backup and restoration tasks, anonymization, transformation, and data masking.
coding-aider
Coding-Aider is a plugin for IntelliJ IDEA that seamlessly integrates Aider's AI-powered coding assistance into the IDE. It boosts productivity by offering rapid access for precision code generation and refactoring, with complete control over the context utilized by the LLM. The plugin provides various features such as AI-powered coding assistance, intuitive access through keyboard shortcuts, persistent file management, dual execution modes, Git integration, real-time progress tracking, multi-file support, web crawling, clipboard image support, and various specialized actions. It also supports structured mode and plans for managing complex features, working directory support, summarized output, and the ability to specify additional arguments for Aider commands. Coding-Aider addresses limitations in existing IntelliJ plugins by offering optimized token usage, a feature-rich terminal interface, a wide range of commands, and robust recovery mechanisms with seamless Git integration.
CogVideo
CogVideo is an open-source repository that provides pretrained text-to-video models for generating videos based on input text. It includes models like CogVideoX-2B and CogVideo, offering powerful video generation capabilities. The repository offers tools for inference, fine-tuning, and model conversion, along with demos showcasing the model's capabilities through CLI, web UI, and online experiences. CogVideo aims to facilitate the creation of high-quality videos from textual descriptions, catering to a wide range of applications.
Controllable-RAG-Agent
This repository contains a sophisticated deterministic graph-based solution for answering complex questions using a controllable autonomous agent. The solution is designed to ensure that answers are solely based on the provided data, avoiding hallucinations. It involves various steps such as PDF loading, text preprocessing, summarization, database creation, encoding, and utilizing large language models. The algorithm follows a detailed workflow involving planning, retrieval, answering, replanning, content distillation, and performance evaluation. Heuristics and techniques implemented focus on content encoding, anonymizing questions, task breakdown, content distillation, chain of thought answering, verification, and model performance evaluation.
AgentForge
AgentForge is a low-code framework tailored for the rapid development, testing, and iteration of AI-powered autonomous agents and Cognitive Architectures. It is compatible with a range of LLM models and offers flexibility to run different models for different agents based on specific needs. The framework is designed for seamless extensibility and database-flexibility, making it an ideal playground for various AI projects. AgentForge is a beta-testing ground and future-proof hub for crafting intelligent, model-agnostic autonomous agents.
AReaL
AReaL (Ant Reasoning RL) is an open-source reinforcement learning system developed at the RL Lab, Ant Research. It is designed for training Large Reasoning Models (LRMs) in a fully open and inclusive manner. AReaL provides reproducible experiments for 1.5B and 7B LRMs, showcasing its scalability and performance across diverse computational budgets. The system follows an iterative training process to enhance model performance, with a focus on mathematical reasoning tasks. AReaL is equipped to adapt to different computational resource settings, enabling users to easily configure and launch training trials. Future plans include support for advanced models, optimizations for distributed training, and exploring research topics to enhance LRMs' reasoning capabilities.
For similar tasks
KG-LLM-MDQA
This repository contains code and demo for Knowledge Graph Prompting for Multi-Document Question Answering. It includes modules for data collection, training DPR and MDR models, fine-tuning T5 and LLaMA, and reproducing KGP-LLM algorithm. The workflow involves document collection, knowledge graph construction, fine-tuning models, and reproducing main table results. The repository provides instructions for environment setup, folder architecture, and running different modules.
openspg
OpenSPG is a knowledge graph engine developed by Ant Group in collaboration with OpenKG, based on the SPG (Semantic-enhanced Programmable Graph) framework. It provides explicit semantic representations, logical rule definitions, operator frameworks (construction, inference), and other capabilities for domain knowledge graphs. OpenSPG supports pluggable adaptation of basic engines and algorithmic services by various vendors to build customized solutions.
Advanced-QA-and-RAG-Series
This repository contains advanced LLM-based chatbots for Retrieval Augmented Generation (RAG) and Q&A with different databases. It provides guides on using AzureOpenAI and OpenAI API for each project. The projects include Q&A and RAG with SQL and Tabular Data, and KnowledgeGraph Q&A and RAG with Tabular Data. Key notes emphasize the importance of good column names, read-only database access, and familiarity with query languages. The chatbots allow users to interact with SQL databases, CSV, XLSX files, and graph databases using natural language.
Aidan-Bench
Aidan Bench is a tool that rewards creativity, reliability, contextual attention, and instruction following. It is weakly correlated with Lmsys, has no score ceiling, and aligns with real-world open-ended use. The tool involves giving LLMs open-ended questions and evaluating their answers based on novelty scores. Users can set up the tool by installing required libraries and setting up API keys. The project allows users to run benchmarks for different models and provides flexibility in threading options.
mindsdb
MindsDB is a platform for customizing AI from enterprise data. You can create, serve, and fine-tune models in real-time from your database, vector store, and application data. MindsDB "enhances" SQL syntax with AI capabilities to make it accessible for developers worldwide. With MindsDB’s nearly 200 integrations, any developer can create AI customized for their purpose, faster and more securely. Their AI systems will constantly improve themselves — using companies’ own data, in real-time.
training-operator
Kubeflow Training Operator is a Kubernetes-native project for fine-tuning and scalable distributed training of machine learning (ML) models created with various ML frameworks such as PyTorch, Tensorflow, XGBoost, MPI, Paddle and others. Training Operator allows you to use Kubernetes workloads to effectively train your large models via Kubernetes Custom Resources APIs or using Training Operator Python SDK. > Note: Before v1.2 release, Kubeflow Training Operator only supports TFJob on Kubernetes. * For a complete reference of the custom resource definitions, please refer to the API Definition. * TensorFlow API Definition * PyTorch API Definition * Apache MXNet API Definition * XGBoost API Definition * MPI API Definition * PaddlePaddle API Definition * For details of all-in-one operator design, please refer to the All-in-one Kubeflow Training Operator * For details on its observability, please refer to the monitoring design doc.
helix
HelixML is a private GenAI platform that allows users to deploy the best of open AI in their own data center or VPC while retaining complete data security and control. It includes support for fine-tuning models with drag-and-drop functionality. HelixML brings the best of open source AI to businesses in an ergonomic and scalable way, optimizing the tradeoff between GPU memory and latency.
nntrainer
NNtrainer is a software framework for training neural network models on devices with limited resources. It enables on-device fine-tuning of neural networks using user data for personalization. NNtrainer supports various machine learning algorithms and provides examples for tasks such as few-shot learning, ResNet, VGG, and product rating. It is optimized for embedded devices and utilizes CBLAS and CUBLAS for accelerated calculations. NNtrainer is open source and released under the Apache License version 2.0.
For similar jobs
sweep
Sweep is an AI junior developer that turns bugs and feature requests into code changes. It automatically handles developer experience improvements like adding type hints and improving test coverage.
teams-ai
The Teams AI Library is a software development kit (SDK) that helps developers create bots that can interact with Teams and Microsoft 365 applications. It is built on top of the Bot Framework SDK and simplifies the process of developing bots that interact with Teams' artificial intelligence capabilities. The SDK is available for JavaScript/TypeScript, .NET, and Python.
ai-guide
This guide is dedicated to Large Language Models (LLMs) that you can run on your home computer. It assumes your PC is a lower-end, non-gaming setup.
classifai
Supercharge WordPress Content Workflows and Engagement with Artificial Intelligence. Tap into leading cloud-based services like OpenAI, Microsoft Azure AI, Google Gemini and IBM Watson to augment your WordPress-powered websites. Publish content faster while improving SEO performance and increasing audience engagement. ClassifAI integrates Artificial Intelligence and Machine Learning technologies to lighten your workload and eliminate tedious tasks, giving you more time to create original content that matters.
chatbot-ui
Chatbot UI is an open-source AI chat app that allows users to create and deploy their own AI chatbots. It is easy to use and can be customized to fit any need. Chatbot UI is perfect for businesses, developers, and anyone who wants to create a chatbot.
BricksLLM
BricksLLM is a cloud native AI gateway written in Go. Currently, it provides native support for OpenAI, Anthropic, Azure OpenAI and vLLM. BricksLLM aims to provide enterprise level infrastructure that can power any LLM production use cases. Here are some use cases for BricksLLM: * Set LLM usage limits for users on different pricing tiers * Track LLM usage on a per user and per organization basis * Block or redact requests containing PIIs * Improve LLM reliability with failovers, retries and caching * Distribute API keys with rate limits and cost limits for internal development/production use cases * Distribute API keys with rate limits and cost limits for students
uAgents
uAgents is a Python library developed by Fetch.ai that allows for the creation of autonomous AI agents. These agents can perform various tasks on a schedule or take action on various events. uAgents are easy to create and manage, and they are connected to a fast-growing network of other uAgents. They are also secure, with cryptographically secured messages and wallets.
griptape
Griptape is a modular Python framework for building AI-powered applications that securely connect to your enterprise data and APIs. It offers developers the ability to maintain control and flexibility at every step. Griptape's core components include Structures (Agents, Pipelines, and Workflows), Tasks, Tools, Memory (Conversation Memory, Task Memory, and Meta Memory), Drivers (Prompt and Embedding Drivers, Vector Store Drivers, Image Generation Drivers, Image Query Drivers, SQL Drivers, Web Scraper Drivers, and Conversation Memory Drivers), Engines (Query Engines, Extraction Engines, Summary Engines, Image Generation Engines, and Image Query Engines), and additional components (Rulesets, Loaders, Artifacts, Chunkers, and Tokenizers). Griptape enables developers to create AI-powered applications with ease and efficiency.