AIGT is a repository containing scripts for deep learning in guided medical interventions, focusing on ultrasound imaging. It provides a complete workflow from formatting and annotations to real-time model deployment. Users can set up an Anaconda environment, run Slicer notebooks, acquire tracked ultrasound data, and process exported data for training. The repository includes tools for segmentation, image export, and annotation creation.

Airbroke is an open-source error catcher tool designed for modern web applications. It provides a PostgreSQL-based backend with an Airbrake-compatible HTTP collector endpoint and a React-based frontend for error management. The tool focuses on simplicity, maintaining a small database footprint even under heavy data ingestion. Users can ask AI about issues, replay HTTP exceptions, and save/manage bookmarks for important occurrences. Airbroke supports multiple OAuth providers for secure user authentication and offers occurrence charts for better insights into error occurrences. The tool can be deployed in various ways, including building from source, using Docker images, deploying on Vercel, Render.com, Kubernetes with Helm, or Docker Compose. It requires Node.js, PostgreSQL, and specific system resources for deployment.

Ask Astro is an open-source reference implementation of Andreessen Horowitz's LLM Application Architecture built by Astronomer. It provides an end-to-end example of a Q&A LLM application used to answer questions about Apache Airflow® and Astronomer. Ask Astro includes Airflow DAGs for data ingestion, an API for business logic, a Slack bot, a public UI, and DAGs for processing user feedback. The tool is divided into data retrieval & embedding, prompt orchestration, and feedback loops.

ChainForge is a visual programming environment for battle-testing prompts to LLMs. It is geared towards early-stage, quick-and-dirty exploration of prompts, chat responses, and response quality that goes beyond ad-hoc chatting with individual LLMs. With ChainForge, you can: * Query multiple LLMs at once to test prompt ideas and variations quickly and effectively. * Compare response quality across prompt permutations, across models, and across model settings to choose the best prompt and model for your use case. * Setup evaluation metrics (scoring function) and immediately visualize results across prompts, prompt parameters, models, and model settings. * Hold multiple conversations at once across template parameters and chat models. Template not just prompts, but follow-up chat messages, and inspect and evaluate outputs at each turn of a chat conversation. ChainForge comes with a number of example evaluation flows to give you a sense of what's possible, including 188 example flows generated from benchmarks in OpenAI evals. This is an open beta of Chainforge. We support model providers OpenAI, HuggingFace, Anthropic, Google PaLM2, Azure OpenAI endpoints, and Dalai-hosted models Alpaca and Llama. You can change the exact model and individual model settings. Visualization nodes support numeric and boolean evaluation metrics. ChainForge is built on ReactFlow and Flask.

FeedGen is an open-source tool that uses Google Cloud's state-of-the-art Large Language Models (LLMs) to improve product titles, generate more comprehensive descriptions, and fill missing attributes in product feeds. It helps merchants and advertisers surface and fix quality issues in their feeds using Generative AI in a simple and configurable way. The tool relies on GCP's Vertex AI API to provide both zero-shot and few-shot inference capabilities on GCP's foundational LLMs. With few-shot prompting, users can customize the model's responses towards their own data, achieving higher quality and more consistent output. FeedGen is an Apps Script based application that runs as an HTML sidebar in Google Sheets, allowing users to optimize their feeds with ease.

Dot is a standalone, open-source application designed for seamless interaction with documents and files using local LLMs and Retrieval Augmented Generation (RAG). It is inspired by solutions like Nvidia's Chat with RTX, providing a user-friendly interface for those without a programming background. Pre-packaged with Mistral 7B, Dot ensures accessibility and simplicity right out of the box. Dot allows you to load multiple documents into an LLM and interact with them in a fully local environment. Supported document types include PDF, DOCX, PPTX, XLSX, and Markdown. Users can also engage with Big Dot for inquiries not directly related to their documents, similar to interacting with ChatGPT. Built with Electron JS, Dot encapsulates a comprehensive Python environment that includes all necessary libraries. The application leverages libraries such as FAISS for creating local vector stores, Langchain, llama.cpp & Huggingface for setting up conversation chains, and additional tools for document management and interaction.

Dataherald is a natural language-to-SQL engine built for enterprise-level question answering over structured data. It allows you to set up an API from your database that can answer questions in plain English. You can use Dataherald to: * Allow business users to get insights from the data warehouse without going through a data analyst * Enable Q+A from your production DBs inside your SaaS application * Create a ChatGPT plug-in from your proprietary data

This repository is a rich resource offering examples of synthetic image generation, manipulation, and reasoning using Azure Machine Learning, Computer Vision, OpenAI, and open-source frameworks like Stable Diffusion. It provides practical insights into image processing applications, including content generation, video analysis, avatar creation, and image manipulation with various tools and APIs.

The NaLLM project repository explores the synergies between Neo4j and Large Language Models (LLMs) through three primary use cases: Natural Language Interface to a Knowledge Graph, Creating a Knowledge Graph from Unstructured Data, and Generating a Report using static and LLM data. The repository contains backend and frontend code organized for easy navigation. It includes blog posts, a demo database, instructions for running demos, and guidelines for contributing. The project aims to showcase the potential of Neo4j and LLMs in various applications.

AppAgent is a novel LLM-based multimodal agent framework designed to operate smartphone applications. Our framework enables the agent to operate smartphone applications through a simplified action space, mimicking human-like interactions such as tapping and swiping. This novel approach bypasses the need for system back-end access, thereby broadening its applicability across diverse apps. Central to our agent's functionality is its innovative learning method. The agent learns to navigate and use new apps either through autonomous exploration or by observing human demonstrations. This process generates a knowledge base that the agent refers to for executing complex tasks across different applications.

LoLLMs WebUI (Lord of Large Language Multimodal Systems: One tool to rule them all) is a user-friendly interface to access and utilize various LLM (Large Language Models) and other AI models for a wide range of tasks. With over 500 AI expert conditionings across diverse domains and more than 2500 fine tuned models over multiple domains, LoLLMs WebUI provides an immediate resource for any problem, from car repair to coding assistance, legal matters, medical diagnosis, entertainment, and more. The easy-to-use UI with light and dark mode options, integration with GitHub repository, support for different personalities, and features like thumb up/down rating, copy, edit, and remove messages, local database storage, search, export, and delete multiple discussions, make LoLLMs WebUI a powerful and versatile tool.

Vespa is a platform that performs operations such as selecting a subset of data in a large corpus, evaluating machine-learned models over the selected data, organizing and aggregating it, and returning it, typically in less than 100 milliseconds, all while the data corpus is continuously changing. It has been in development for many years and is used on a number of large internet services and apps which serve hundreds of thousands of queries from Vespa per second.

Supervisely is a computer vision platform that provides a range of tools and services for developing and deploying computer vision solutions. It includes a data labeling platform, a model training platform, and a marketplace for computer vision apps. Supervisely is used by a variety of organizations, including Fortune 500 companies, research institutions, and government agencies.

PyAirbyte brings the power of Airbyte to every Python developer by providing a set of utilities to use Airbyte connectors in Python. It enables users to easily manage secrets, work with various connectors like GitHub, Shopify, and Postgres, and contribute to the project. PyAirbyte is not a replacement for Airbyte but complements it, supporting data orchestration frameworks like Airflow and Snowpark. Users can develop ETL pipelines and import connectors from local directories. The tool simplifies data integration tasks for Python developers.

The Alignment Handbook provides robust training recipes for continuing pretraining and aligning language models with human and AI preferences. It includes techniques such as continued pretraining, supervised fine-tuning, reward modeling, rejection sampling, and direct preference optimization (DPO). The handbook aims to fill the gap in public resources on training these models, collecting data, and measuring metrics for optimal downstream performance.

Examor is a website application that allows you to take exams based on your knowledge notes. It helps you to remember what you have learned and written. The application generates a set of questions from the documents you upload, and you can answer them to test your knowledge. Examor also uses GPT to score and validate your answers, and provides you with feedback. The application is still in its early stages of development, but it has the potential to be a valuable tool for learners.

AIGT is a repository containing scripts for deep learning in guided medical interventions, focusing on ultrasound imaging. It provides a complete workflow from formatting and annotations to real-time model deployment. Users can set up an Anaconda environment, run Slicer notebooks, acquire tracked ultrasound data, and process exported data for training. The repository includes tools for segmentation, image export, and annotation creation.

AIStore is a lightweight object storage system designed for AI applications. It is highly scalable, reliable, and easy to use. AIStore can be deployed on any commodity hardware, and it can be used to store and manage large datasets for deep learning and other AI applications.

cl-waffe2 is an experimental deep learning framework in Common Lisp, providing fast, systematic, and customizable matrix operations, reverse mode tape-based Automatic Differentiation, and neural network model building and training features accelerated by a JIT Compiler. It offers abstraction layers, extensibility, inlining, graph-level optimization, visualization, debugging, systematic nodes, and symbolic differentiation. Users can easily write extensions and optimize their networks without overheads. The framework is designed to eliminate barriers between users and developers, allowing for easy customization and extension.

DeepLearning-Interview-Awesome-2024 is a repository that covers various topics related to deep learning, computer vision, big models (LLMs), autonomous driving, smart healthcare, and more. It provides a collection of interview questions with detailed explanations sourced from recent academic papers and industry developments. The repository is aimed at assisting individuals in academic research, work innovation, and job interviews. It includes six major modules covering topics such as large language models (LLMs), computer vision models, common problems in computer vision and perception algorithms, deep learning basics and frameworks, as well as specific tasks like 3D object detection, medical image segmentation, and more.

PINNACLE is a flexible geometric deep learning approach that trains on contextualized protein interaction networks to generate context-aware protein representations. It provides protein representations split across various cell-type contexts from different tissues and organs. The tool can be fine-tuned to study the genomic effects of drugs and nominate promising protein targets and cell-type contexts for further investigation. PINNACLE exemplifies the paradigm of incorporating context-specific effects for studying biological systems, especially the impact of disease and therapeutics.

Grand Challenge is a platform that provides access to large amounts of annotated training data, objective comparisons of state-of-the-art machine learning solutions, and clinical validation using real-world data. It assists researchers, data scientists, and clinicians in collaborating to develop robust machine learning solutions to problems in biomedical imaging.

This tool is designed to detect and classify Alzheimer's Disease using Deep Learning and Machine Learning algorithms on an early basis, which is further optimized using the Crow Search Algorithm (CSA). Alzheimer's is a fatal disease, and early detection is crucial for patients to predetermine their condition and prevent its progression. By analyzing MRI scanned images using Artificial Intelligence technology, this tool can classify patients who may or may not develop AD in the future. The CSA algorithm, combined with ML algorithms, has proven to be the most effective approach for this purpose.

OpenCRISPR is a set of free and open gene editing systems designed by Profluent Bio. The OpenCRISPR-1 protein maintains the prototypical architecture of a Type II Cas9 nuclease but is hundreds of mutations away from SpCas9 or any other known natural CRISPR-associated protein. You can view OpenCRISPR-1 as a drop-in replacement for many protocols that need a cas9-like protein with an NGG PAM and you can even use it with canonical SpCas9 gRNAs. OpenCRISPR-1 can be fused in a deactivated or nickase format for next generation gene editing techniques like base, prime, or epigenome editing.

AlphaFold3 is an implementation of the Alpha Fold 3 model in PyTorch for accurate structure prediction of biomolecular interactions. It includes modules for genetic diffusion and full model examples for forward pass computations. The tool allows users to generate random pair and single representations, operate on atomic coordinates, and perform structure predictions based on input tensors. The implementation also provides functionalities for training and evaluating the model.

FuseMedML is a Python framework designed to accelerate machine learning-based discovery in the medical field by promoting code reuse. It provides a flexible design concept where data is stored in a nested dictionary, allowing easy handling of multi-modality information. The framework includes components for creating custom models, loss functions, metrics, and data processing operators. Additionally, FuseMedML offers 'batteries included' key components such as fuse.data for data processing, fuse.eval for model evaluation, and fuse.dl for reusable deep learning components. It supports PyTorch and PyTorch Lightning libraries and encourages the creation of domain extensions for specific medical domains.

The Microsoft Health Intelligence Machine Learning Toolbox is a repository that provides low-level and high-level building blocks for Machine Learning / AI researchers and practitioners. It simplifies and streamlines work on deep learning models for healthcare and life sciences by offering tested components such as data loaders, pre-processing tools, deep learning models, and cloud integration utilities. The repository includes two Python packages, 'hi-ml-azure' for helper functions in AzureML, 'hi-ml' for ML components, and 'hi-ml-cpath' for models and workflows related to histopathology images.

TotalSegmentator is a 3D Slicer extension designed for fully automatic whole body CT segmentation using the 'TotalSegmentator' AI model. The computation time is less than one minute, making it efficient for research purposes. Users can set up GPU acceleration for faster segmentation. The tool provides a user-friendly interface for loading CT images, creating segmentations, and displaying results in 3D. Troubleshooting steps are available for common issues such as failed computation, GPU errors, and inaccurate segmentations. Contributions to the extension are welcome, following 3D Slicer contribution guidelines.

MD-Agent is a LLM-agent based toolset for Molecular Dynamics. It uses Langchain and a collection of tools to set up and execute molecular dynamics simulations, particularly in OpenMM. The tool assists in environment setup, installation, and usage by providing detailed steps. It also requires API keys for certain functionalities, such as OpenAI and paper-qa for literature searches. Contributions to the project are welcome, with a detailed Contributor's Guide available for interested individuals.