FuseMedML is a Python framework designed to accelerate machine learning-based discovery in the medical field by promoting code reuse. It provides a flexible design concept where data is stored in a nested dictionary, allowing easy handling of multi-modality information. The framework includes components for creating custom models, loss functions, metrics, and data processing operators. Additionally, FuseMedML offers 'batteries included' key components such as fuse.data for data processing, fuse.eval for model evaluation, and fuse.dl for reusable deep learning components. It supports PyTorch and PyTorch Lightning libraries and encourages the creation of domain extensions for specific medical domains.

PremSQL is an open-source library designed to help developers create secure, fully local Text-to-SQL solutions using small language models. It provides essential tools for building and deploying end-to-end Text-to-SQL pipelines with customizable components, ideal for secure, autonomous AI-powered data analysis. The library offers features like Local-First approach, Customizable Datasets, Robust Executors and Evaluators, Advanced Generators, Error Handling and Self-Correction, Fine-Tuning Support, and End-to-End Pipelines. Users can fine-tune models, generate SQL queries from natural language inputs, handle errors, and evaluate model performance against predefined metrics. PremSQL is extendible for customization and private data usage.

MInference is a tool designed to accelerate pre-filling for long-context Language Models (LLMs) by leveraging dynamic sparse attention. It achieves up to a 10x speedup for pre-filling on an A100 while maintaining accuracy. The tool supports various decoding LLMs, including LLaMA-style models and Phi models, and provides custom kernels for attention computation. MInference is useful for researchers and developers working with large-scale language models who aim to improve efficiency without compromising accuracy.

Instructor for PHP is a library designed for structured data extraction in PHP, powered by Large Language Models (LLMs). It simplifies the process of extracting structured, validated data from unstructured text or chat sequences. Instructor enhances workflow by providing a response model, validation capabilities, and max retries for requests. It supports classes as response models and provides features like partial results, string input, extracting scalar and enum values, and specifying data models using PHP type hints or DocBlock comments. The library allows customization of validation and provides detailed event notifications during request processing. Instructor is compatible with PHP 8.2+ and leverages PHP reflection, Symfony components, and SaloonPHP for communication with LLM API providers.

MME-RealWorld is a benchmark designed to address real-world applications with practical relevance, featuring 13,366 high-resolution images and 29,429 annotations across 43 tasks. It aims to provide substantial recognition challenges and overcome common barriers in existing Multimodal Large Language Model benchmarks, such as small data scale, restricted data quality, and insufficient task difficulty. The dataset offers advantages in data scale, data quality, task difficulty, and real-world utility compared to existing benchmarks. It also includes a Chinese version with additional images and QA pairs focused on Chinese scenarios.

POML (Prompt Orchestration Markup Language) is a novel markup language designed to bring structure, maintainability, and versatility to advanced prompt engineering for Large Language Models (LLMs). It addresses common challenges in prompt development, such as lack of structure, complex data integration, format sensitivity, and inadequate tooling. POML provides a systematic way to organize prompt components, integrate diverse data types seamlessly, and manage presentation variations, empowering developers to create more sophisticated and reliable LLM applications.

DemoGPT is an all-in-one agent library that provides tools, prompts, frameworks, and LLM models for streamlined agent development. It leverages GPT-3.5-turbo to generate LangChain code, creating interactive Streamlit applications. The tool is designed for creating intelligent, interactive, and inclusive solutions in LLM-based application development. It offers model flexibility, iterative development, and a commitment to user engagement. Future enhancements include integrating Gorilla for autonomous API usage and adding a publicly available database for refining the generation process.

LLM-on-Ray is a comprehensive solution for building, customizing, and deploying Large Language Models (LLMs). It simplifies complex processes into manageable steps by leveraging the power of Ray for distributed computing. The tool supports pretraining, finetuning, and serving LLMs across various hardware setups, incorporating industry and Intel optimizations for performance. It offers modular workflows with intuitive configurations, robust fault tolerance, and scalability. Additionally, it provides an Interactive Web UI for enhanced usability, including a chatbot application for testing and refining models.

SheetCopilot is an assistant agent that manipulates spreadsheets by following user commands. It leverages Large Language Models (LLMs) to interact with spreadsheets like a human expert, enabling non-expert users to complete tasks on complex software such as Google Sheets and Excel via a language interface. The tool observes spreadsheet states, polishes generated solutions based on external action documents and error feedback, and aims to improve success rate and efficiency. SheetCopilot offers a dataset with diverse task categories and operations, supporting operations like entry & manipulation, management, formatting, charts, and pivot tables. Users can interact with SheetCopilot in Excel or Google Sheets, executing tasks like calculating revenue, creating pivot tables, and plotting charts. The tool's evaluation includes performance comparisons with leading LLMs and VBA-based methods on specific datasets, showcasing its capabilities in controlling various aspects of a spreadsheet.

EDA GPT is an open-source data analysis companion that offers a comprehensive solution for structured and unstructured data analysis. It streamlines the data analysis process, empowering users to explore, visualize, and gain insights from their data. EDA GPT supports analyzing structured data in various formats like CSV, XLSX, and SQLite, generating graphs, and conducting in-depth analysis of unstructured data such as PDFs and images. It provides a user-friendly interface, powerful features, and capabilities like comparing performance with other tools, analyzing large language models, multimodal search, data cleaning, and editing. The tool is optimized for maximal parallel processing, searching internet and documents, and creating analysis reports from structured and unstructured data.

OpenMusic is a repository providing an implementation of QA-MDT, a Quality-Aware Masked Diffusion Transformer for music generation. The code integrates state-of-the-art models and offers training strategies for music generation. The repository includes implementations of AudioLDM, PixArt-alpha, MDT, AudioMAE, and Open-Sora. Users can train or fine-tune the model using different strategies and datasets. The model is well-pretrained and can be used for music generation tasks. The repository also includes instructions for preparing datasets, training the model, and performing inference. Contact information is provided for any questions or suggestions regarding the project.

Endia is a dynamic Array library for Scientific Computing, offering automatic differentiation of arbitrary order, complex number support, dual API with PyTorch-like imperative or JAX-like functional interface, and JIT Compilation for speeding up training and inference. It can handle complex valued functions, perform both forward and reverse-mode automatic differentiation, and has a builtin JIT compiler. Endia aims to advance AI & Scientific Computing by pushing boundaries with clear algorithms, providing high-performance open-source code that remains readable and pythonic, and prioritizing clarity and educational value over exhaustive features.

LABO is a time series forecasting and analysis framework that integrates pre-trained and fine-tuned LLMs with multi-domain agent-based systems. It allows users to create and tune agents easily for various scenarios, such as stock market trend prediction and web public opinion analysis. LABO requires a specific runtime environment setup, including system requirements, Python environment, dependency installations, and configurations. Users can fine-tune their own models using LABO's Low-Rank Adaptation (LoRA) for computational efficiency and continuous model updates. Additionally, LABO provides a Python library for building model training pipelines and customizing agents for specific tasks.

Easy-Translate is a script designed for translating large text files with a single command. It supports various models like M2M100, NLLB200, SeamlessM4T, LLaMA, and Bloom. The tool is beginner-friendly and offers seamless and customizable features for advanced users. It allows acceleration on CPU, multi-CPU, GPU, multi-GPU, and TPU, with support for different precisions and decoding strategies. Easy-Translate also provides an evaluation script for translations. Built on HuggingFace's Transformers and Accelerate library, it supports prompt usage and loading huge models efficiently.

RepoAgent is an LLM-powered framework designed for repository-level code documentation generation. It automates the process of detecting changes in Git repositories, analyzing code structure through AST, identifying inter-object relationships, replacing Markdown content, and executing multi-threaded operations. The tool aims to assist developers in understanding and maintaining codebases by providing comprehensive documentation, ultimately improving efficiency and saving time.

GuideLLM is a powerful tool for evaluating and optimizing the deployment of large language models (LLMs). By simulating real-world inference workloads, GuideLLM helps users gauge the performance, resource needs, and cost implications of deploying LLMs on various hardware configurations. This approach ensures efficient, scalable, and cost-effective LLM inference serving while maintaining high service quality. Key features include performance evaluation, resource optimization, cost estimation, and scalability testing.

FuseMedML is a Python framework designed to accelerate machine learning-based discovery in the medical field by promoting code reuse. It provides a flexible design concept where data is stored in a nested dictionary, allowing easy handling of multi-modality information. The framework includes components for creating custom models, loss functions, metrics, and data processing operators. Additionally, FuseMedML offers 'batteries included' key components such as fuse.data for data processing, fuse.eval for model evaluation, and fuse.dl for reusable deep learning components. It supports PyTorch and PyTorch Lightning libraries and encourages the creation of domain extensions for specific medical domains.

Grand Challenge is a platform that provides access to large amounts of annotated training data, objective comparisons of state-of-the-art machine learning solutions, and clinical validation using real-world data. It assists researchers, data scientists, and clinicians in collaborating to develop robust machine learning solutions to problems in biomedical imaging.

This tool is designed to detect and classify Alzheimer's Disease using Deep Learning and Machine Learning algorithms on an early basis, which is further optimized using the Crow Search Algorithm (CSA). Alzheimer's is a fatal disease, and early detection is crucial for patients to predetermine their condition and prevent its progression. By analyzing MRI scanned images using Artificial Intelligence technology, this tool can classify patients who may or may not develop AD in the future. The CSA algorithm, combined with ML algorithms, has proven to be the most effective approach for this purpose.

OpenCRISPR is a set of free and open gene editing systems designed by Profluent Bio. The OpenCRISPR-1 protein maintains the prototypical architecture of a Type II Cas9 nuclease but is hundreds of mutations away from SpCas9 or any other known natural CRISPR-associated protein. You can view OpenCRISPR-1 as a drop-in replacement for many protocols that need a cas9-like protein with an NGG PAM and you can even use it with canonical SpCas9 gRNAs. OpenCRISPR-1 can be fused in a deactivated or nickase format for next generation gene editing techniques like base, prime, or epigenome editing.

AlphaFold3 is an implementation of the Alpha Fold 3 model in PyTorch for accurate structure prediction of biomolecular interactions. It includes modules for genetic diffusion and full model examples for forward pass computations. The tool allows users to generate random pair and single representations, operate on atomic coordinates, and perform structure predictions based on input tensors. The implementation also provides functionalities for training and evaluating the model.

FuseMedML is a Python framework designed to accelerate machine learning-based discovery in the medical field by promoting code reuse. It provides a flexible design concept where data is stored in a nested dictionary, allowing easy handling of multi-modality information. The framework includes components for creating custom models, loss functions, metrics, and data processing operators. Additionally, FuseMedML offers 'batteries included' key components such as fuse.data for data processing, fuse.eval for model evaluation, and fuse.dl for reusable deep learning components. It supports PyTorch and PyTorch Lightning libraries and encourages the creation of domain extensions for specific medical domains.

The Microsoft Health Intelligence Machine Learning Toolbox is a repository that provides low-level and high-level building blocks for Machine Learning / AI researchers and practitioners. It simplifies and streamlines work on deep learning models for healthcare and life sciences by offering tested components such as data loaders, pre-processing tools, deep learning models, and cloud integration utilities. The repository includes two Python packages, 'hi-ml-azure' for helper functions in AzureML, 'hi-ml' for ML components, and 'hi-ml-cpath' for models and workflows related to histopathology images.

TotalSegmentator is a 3D Slicer extension designed for fully automatic whole body CT segmentation using the 'TotalSegmentator' AI model. The computation time is less than one minute, making it efficient for research purposes. Users can set up GPU acceleration for faster segmentation. The tool provides a user-friendly interface for loading CT images, creating segmentations, and displaying results in 3D. Troubleshooting steps are available for common issues such as failed computation, GPU errors, and inaccurate segmentations. Contributions to the extension are welcome, following 3D Slicer contribution guidelines.

MD-Agent is a LLM-agent based toolset for Molecular Dynamics. It uses Langchain and a collection of tools to set up and execute molecular dynamics simulations, particularly in OpenMM. The tool assists in environment setup, installation, and usage by providing detailed steps. It also requires API keys for certain functionalities, such as OpenAI and paper-qa for literature searches. Contributions to the project are welcome, with a detailed Contributor's Guide available for interested individuals.