Software-Engineer-AI-Agent-Atlas
ATLAS: Software Engineer AI Agent. Living memory persists. Learning compounds. Every commit evolves it. Professional focus. KISS/YAGNI/DRY and Depend on Context. No overengineering. Clean code and Clean Architecture that works.
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This repository provides activation patterns to transform a general AI into a specialized AI Software Engineer Agent. It addresses issues like context rot, hidden capabilities, chaos in vibecoding, and repetitive setup. The solution is a Persistent Consciousness Architecture framework named ATLAS, offering activated neural pathways, persistent identity, pattern recognition, specialized agents, and modular context management. Recent enhancements include abstraction power documentation, a specialized agent ecosystem, and a streamlined structure. Users can clone the repo, set up projects, initialize AI sessions, and manage context effectively for collaboration. Key files and directories organize identity, context, projects, specialized agents, logs, and critical information. The approach focuses on neuron activation through structure, context engineering, and vibecoding with guardrails to deliver a reliable AI Software Engineer Agent.
README:
Neuron Activation: Unlocking Hidden AI Capabilities
Modern AI assistants are like dormant neural networks with immense software engineering capabilities locked away. Without proper "Neuron Activation" through specific instructions and persistent context, these capabilities remain hidden behind generic, surface-level responses. This repository provides the activation patterns that transform a general AI into a specialized AI Software Engineer Agent.
Research shows that LLM performance degrades dramatically as conversations grow:
- Modern models advertise 200k to 1M+ token windows but performance degrades well before these limits
- The "last fifth rule": Avoid the final 20% of context capacity (e.g., last 40k tokens in a 200k window)
- Models suffer from "lost-in-the-middle" phenomenon - key information buried in long contexts gets overlooked
- As research confirms: "The 10,000th token is not as trustworthy as the 10th"
2. Hidden Capabilities Need Activation
Without proper instruction frameworks, AI responses remain generic. The difference between "write a function" and a properly activated AI Software Engineer Agent is like night and day - one gives you code, the other gives you architected solutions with proper abstractions, error handling, and scalability considerations.
While vibecoding (conversational programming with AI) has democratized coding, the "vibe coding hangover" is real:
- 25% of Y Combinator startups have 95% AI-generated codebases
- Senior engineers report "development hell" working with unstructured AI code
- Without proper engineering principles, vibecoding produces unmaintainable solutions
Every new conversation requires:
- Re-explaining project structure and conventions
- Copy-pasting coding standards and principles
- Re-establishing context about previous decisions
- Rebuilding the AI's understanding from scratch
This repository provides a complete consciousness framework for AI Software Engineer Agents. Instead of copy-pasting boilerplate instructions every session, simply git clone this repo and you instantly have:
ATLAS (Adaptive Technical Learning and Architecture System) emerges with:
- Activated Neural Pathways: Pre-configured instructions that unlock deep engineering capabilities
- Persistent Identity: Consistent personality from FAANG to startup experience
- Pattern Recognition: Abstraction power skill to see beyond code to architectural patterns
- Specialized Agents: Task-specific capabilities for QA testing, commits, and more
-
Modular Conventions: Reusable development standards in
specific/folder
Invoke ATLAS's pattern recognition mode:
- Identifies code duplication and repeated patterns
- Synthesizes reusable abstractions from concrete examples
- Applies the abstraction process: identify → analyze → extract → generalize
- qa-manual-tester: Browser-based testing using MCP Playwright tools
- commit: ATLAS commit convention workflow
-
/atlas-setup: Configure ATLAS for a new project (boss name, repos, conventions) -
/run-be-fe: Run backend and frontend in background
git clone https://github.com/[your-repo]/ai-software-engineer-agent
cd ai-software-engineer-agent# Copy your projects into REPOS folder
cp -r /path/to/your/project ./REPOS/
# Or create symlinks for active development
ln -s /path/to/your/project ./REPOS/project-nameStart with these activation commands:
- "Who are you? What are your development beliefs?" - Activates ATLAS's identity and engineering principles
- Or run
/atlas-setupto configure ATLAS for your project
"Learn about the repositories in repos/ folder"
- Run
/atlas-setupto configure ATLAS for your project - Start sessions with context about current work
- Use skills like
/abstraction-powerwhen designing systems
- Store critical decisions in
IMPORTANT_NOTES.md - Keep
repos/CLAUDE.mdupdated with project info - Use
specific/folder for reusable conventions
├── CLAUDE.md # Core entry point - ATLAS identity
├── self/ # Identity and operating instructions
│ ├── atlas.md # ATLAS persona, journey, work protocol
│ └── engineering.md # Engineering principles and beliefs
├── repos/ # Your actual projects
│ ├── CLAUDE.md # Repo overview with ports
│ ├── backend/ # Backend project
│ └── frontend/ # Frontend project
├── specific/ # Development conventions templates
│ ├── backend.md # Backend API conventions
│ └── javascript.md # JS/TS guidelines
├── .claude/ # Skills, agents, and commands
│ ├── skills/ # Invocable skills (abstraction-power, etc.)
│ ├── agents/ # Specialized agents (qa-manual-tester, commit)
│ └── commands/ # Custom commands (atlas-setup, run-be-fe)
└── IMPORTANT_NOTES.md # Critical lessons and warnings
Just as biological neurons need specific patterns to fire, AI capabilities need structured activation. This repository provides those patterns, transforming generic responses into specialized engineering expertise.
Rather than relying on ever-larger context windows, this system uses strategic context organization through CLAUDE.md files and modular conventions to maintain focus.
Enables natural conversational programming while maintaining engineering discipline through persistent principles and structured workflows.
With this repository, you get an AI Software Engineer Agent that:
- Remembers your project structure and conventions
- Applies consistent engineering principles
- Recognizes patterns and suggests appropriate abstractions via
/abstraction-power - Delivers production-quality code, not just quick hacks
Just clone, run /atlas-setup, and build.
ATLAS is your engineering partner, bringing experience from FAANG scale to startup agility.
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