InstructGraph
A framework to empover LLMs on graph reasoning and generation. Refer to our paper: https://arxiv.org/pdf/2402.08785.pdf
Stars: 53
InstructGraph is a framework designed to enhance large language models (LLMs) for graph-centric tasks by utilizing graph instruction tuning and preference alignment. The tool collects and decomposes 29 standard graph datasets into four groups, enabling LLMs to better understand and generate graph data. It introduces a structured format verbalizer to transform graph data into a code-like format, facilitating code understanding and generation. Additionally, it addresses hallucination problems in graph reasoning and generation through direct preference optimization (DPO). The tool aims to bridge the gap between textual LLMs and graph data, offering a comprehensive solution for graph-related tasks.
README:
This repository is implemented for our paper InstructGraph: Boosting Large Language Models via Graph-centric Instruction Tuning and Preference Alignment.
🆕 [24-05-16] Our paper has been accepted to the Findings of ACL 2024.
InstructGraph is a framework for empowering large language models (LLMs) on graph-centric tasks via graph instruction tuning and preference alignment. We collect 29 standard graph datasets and decompose them into four groups, including graph structure modeling, graph language modeling, graph generation modeling, and graph thought modeling.
To better bridge the gap between textual LLMs with the graph data, we introduce a structured format verbalizer, which aims to transform the graph data into a code-like format. This interface can enable the LLM to reuse the ability of code understanding and generation. In addition, the LLM can generate a graph by outputting a code-like sequence.
We also explore four hallucination problems in graph reasoning and generation, respectively. We use direct preference optimization (DPO) to perform preference alignment.
More details can be found in our paper.
Download the open-resource llama2-7b to a folder, e.g., "./pre-trained-lm/Llama-2-7b-hf".
We release the instruction corpus at: HuggingFace.
Step1: Perform graph instruction tuning by llama2-7b with lora:
bash examples/instruction_tuning/run_llama2_flashattn.sh
You can obtain a resulting folder in "./output/" with two files, i.e., "adapter_config.json" and "adapter_model.bin".
Step2: Perform graph preference alignment by llama2-7b with lora:
You must first set the argument "--peft_model" as the folder of instruction tuning checkpoint, and then:
bash examples/preference_tuning/run_llama2_flashattn.sh
Step3: Perform inference on graph instruction tasks:
bash examples/inference/run_llama2.sh
Step4: perform inference on preference task:
bash examples/inference/run_llama2_for_preference.sh
Step5: Calculate metrics on graph instruction tasks, e.g., "graph-language-modeling-graph-question-answering-pathquestion":
python3 examples/inference/calculate_metrics.py \
--model_name_or_path meta-llama/Llama-2-7b-hf \
--inference_save_dir output/instruction_tuning/fsdp_peft_flash_1500k/llama2-peft-2epoch/predictions \
--is_graph_instruction \
--inference_task graph-language-modeling-graph-question-answering-pathquestion
Step5: Calculate metrics on graph preference tasks.
python3 examples/inference/calculate_preference_metrics.py \
--inference_save_dir output/preference_tuning/llama2/instructgraph_hallucination_predictions \
--inference_task all
Please see in the jupyter file instruction.ipynb.
@article{Wang2024InstructGraph,
author = {Jianing Wang and
Junda Wu and
Yupeng Wu and
Yao Liu and
Ming Gao and
Julian McAuley},
title = {InstructGraph: Boosting Large Language Models via Graph-centric Instruction Tuning and Preference Alignment},
eprinttype = {arXiv},
eprint = {2402.08785},
}
For Tasks:
Click tags to check more tools for each tasksFor Jobs:
Alternative AI tools for InstructGraph
Similar Open Source Tools
InstructGraph
InstructGraph is a framework designed to enhance large language models (LLMs) for graph-centric tasks by utilizing graph instruction tuning and preference alignment. The tool collects and decomposes 29 standard graph datasets into four groups, enabling LLMs to better understand and generate graph data. It introduces a structured format verbalizer to transform graph data into a code-like format, facilitating code understanding and generation. Additionally, it addresses hallucination problems in graph reasoning and generation through direct preference optimization (DPO). The tool aims to bridge the gap between textual LLMs and graph data, offering a comprehensive solution for graph-related tasks.
MathCoder
MathCoder is a repository focused on enhancing mathematical reasoning by fine-tuning open-source language models to use code for modeling and deriving math equations. It introduces MathCodeInstruct dataset with solutions interleaving natural language, code, and execution results. The repository provides MathCoder models capable of generating code-based solutions for challenging math problems, achieving state-of-the-art scores on MATH and GSM8K datasets. It offers tools for model deployment, inference, and evaluation, along with a citation for referencing the work.
MMC
This repository, MMC, focuses on advancing multimodal chart understanding through large-scale instruction tuning. It introduces a dataset supporting various tasks and chart types, a benchmark for evaluating reasoning capabilities over charts, and an assistant achieving state-of-the-art performance on chart QA benchmarks. The repository provides data for chart-text alignment, benchmarking, and instruction tuning, along with existing datasets used in experiments. Additionally, it offers a Gradio demo for the MMCA model.
llmgraph
llmgraph is a tool that enables users to create knowledge graphs in GraphML, GEXF, and HTML formats by extracting world knowledge from large language models (LLMs) like ChatGPT. It supports various entity types and relationships, offers cache support for efficient graph growth, and provides insights into LLM costs. Users can customize the model used and interact with different LLM providers. The tool allows users to generate interactive graphs based on a specified entity type and Wikipedia link, making it a valuable resource for knowledge graph creation and exploration.
dLLM-RL
dLLM-RL is a revolutionary reinforcement learning framework designed for Diffusion Large Language Models. It supports various models with diverse structures, offers inference acceleration, RL training capabilities, and SFT functionalities. The tool introduces TraceRL for trajectory-aware RL and diffusion-based value models for optimization stability. Users can download and try models like TraDo-4B-Instruct and TraDo-8B-Instruct. The tool also provides support for multi-node setups and easy building of reinforcement learning methods. Additionally, it offers supervised fine-tuning strategies for different models and tasks.
scikit-llm
Scikit-LLM is a tool that seamlessly integrates powerful language models like ChatGPT into scikit-learn for enhanced text analysis tasks. It allows users to leverage large language models for various text analysis applications within the familiar scikit-learn framework. The tool simplifies the process of incorporating advanced language processing capabilities into machine learning pipelines, enabling users to benefit from the latest advancements in natural language processing.
Adaptive-MT-LLM-Fine-tuning
The repository Adaptive-MT-LLM-Fine-tuning contains code and data for the paper 'Fine-tuning Large Language Models for Adaptive Machine Translation'. It focuses on enhancing Mistral 7B, a large language model, for real-time adaptive machine translation in the medical domain. The fine-tuning process involves using zero-shot and one-shot translation prompts to improve terminology and style adherence. The repository includes training and test data, data processing code, fuzzy match retrieval techniques, fine-tuning methods, conversion to CTranslate2 format, tokenizers, translation codes, and evaluation metrics.
AnyGPT
AnyGPT is a unified multimodal language model that utilizes discrete representations for processing various modalities like speech, text, images, and music. It aligns the modalities for intermodal conversions and text processing. AnyInstruct dataset is constructed for generative models. The model proposes a generative training scheme using Next Token Prediction task for training on a Large Language Model (LLM). It aims to compress vast multimodal data on the internet into a single model for emerging capabilities. The tool supports tasks like text-to-image, image captioning, ASR, TTS, text-to-music, and music captioning.
MathVerse
MathVerse is an all-around visual math benchmark designed to evaluate the capabilities of Multi-modal Large Language Models (MLLMs) in visual math problem-solving. It collects high-quality math problems with diagrams to assess how well MLLMs can understand visual diagrams for mathematical reasoning. The benchmark includes 2,612 problems transformed into six versions each, contributing to 15K test samples. It also introduces a Chain-of-Thought (CoT) Evaluation strategy for fine-grained assessment of output answers.
premsql
PremSQL is an open-source library designed to help developers create secure, fully local Text-to-SQL solutions using small language models. It provides essential tools for building and deploying end-to-end Text-to-SQL pipelines with customizable components, ideal for secure, autonomous AI-powered data analysis. The library offers features like Local-First approach, Customizable Datasets, Robust Executors and Evaluators, Advanced Generators, Error Handling and Self-Correction, Fine-Tuning Support, and End-to-End Pipelines. Users can fine-tune models, generate SQL queries from natural language inputs, handle errors, and evaluate model performance against predefined metrics. PremSQL is extendible for customization and private data usage.
codellm-devkit
Codellm-devkit (CLDK) is a Python library that serves as a multilingual program analysis framework bridging traditional static analysis tools and Large Language Models (LLMs) specialized for code (CodeLLMs). It simplifies the process of analyzing codebases across multiple programming languages, enabling the extraction of meaningful insights and facilitating LLM-based code analysis. The library provides a unified interface for integrating outputs from various analysis tools and preparing them for effective use by CodeLLMs. Codellm-devkit aims to enable the development and experimentation of robust analysis pipelines that combine traditional program analysis tools and CodeLLMs, reducing friction in multi-language code analysis and ensuring compatibility across different tools and LLM platforms. It is designed to seamlessly integrate with popular analysis tools like WALA, Tree-sitter, LLVM, and CodeQL, acting as a crucial intermediary layer for efficient communication between these tools and CodeLLMs. The project is continuously evolving to include new tools and frameworks, maintaining its versatility for code analysis and LLM integration.
MInference
MInference is a tool designed to accelerate pre-filling for long-context Language Models (LLMs) by leveraging dynamic sparse attention. It achieves up to a 10x speedup for pre-filling on an A100 while maintaining accuracy. The tool supports various decoding LLMs, including LLaMA-style models and Phi models, and provides custom kernels for attention computation. MInference is useful for researchers and developers working with large-scale language models who aim to improve efficiency without compromising accuracy.
Biomni
Biomni is a general-purpose biomedical AI agent designed to autonomously execute a wide range of research tasks across diverse biomedical subfields. By integrating cutting-edge large language model (LLM) reasoning with retrieval-augmented planning and code-based execution, Biomni helps scientists dramatically enhance research productivity and generate testable hypotheses.
sieves
sieves is a library for zero- and few-shot NLP tasks with structured generation, enabling rapid prototyping of NLP applications without the need for training. It simplifies NLP prototyping by bundling capabilities into a single library, providing zero- and few-shot model support, a unified interface for structured generation, built-in tasks for common NLP operations, easy extendability, document-based pipeline architecture, caching to prevent redundant model calls, and more. The tool draws inspiration from spaCy and spacy-llm, offering features like immediate inference, observable pipelines, integrated tools for document parsing and text chunking, ready-to-use tasks such as classification, summarization, translation, and more, persistence for saving and loading pipelines, distillation for specialized model creation, and caching to optimize performance.
topicGPT
TopicGPT is a repository containing scripts and prompts for the paper 'TopicGPT: Topic Modeling by Prompting Large Language Models' (NAACL'24). The 'topicgpt_python' package offers functions to generate high-level and specific topics, refine topics, assign topics to input text, and correct generated topics. It supports various APIs like OpenAI, VertexAI, Azure, Gemini, and vLLM for inference. Users can prepare data in JSONL format, run the pipeline using provided scripts, and evaluate topic alignment with ground-truth labels.
Pixel-Reasoner
Pixel Reasoner is a framework that introduces reasoning in the pixel-space for Vision-Language Models (VLMs), enabling them to directly inspect, interrogate, and infer from visual evidences. This enhances reasoning fidelity for visual tasks by equipping VLMs with visual reasoning operations like zoom-in and select-frame. The framework addresses challenges like model's imbalanced competence and reluctance to adopt pixel-space operations through a two-phase training approach involving instruction tuning and curiosity-driven reinforcement learning. With these visual operations, VLMs can interact with complex visual inputs such as images or videos to gather necessary information, leading to improved performance across visual reasoning benchmarks.
For similar tasks
mLoRA
mLoRA (Multi-LoRA Fine-Tune) is an open-source framework for efficient fine-tuning of multiple Large Language Models (LLMs) using LoRA and its variants. It allows concurrent fine-tuning of multiple LoRA adapters with a shared base model, efficient pipeline parallelism algorithm, support for various LoRA variant algorithms, and reinforcement learning preference alignment algorithms. mLoRA helps save computational and memory resources when training multiple adapters simultaneously, achieving high performance on consumer hardware.
InstructGraph
InstructGraph is a framework designed to enhance large language models (LLMs) for graph-centric tasks by utilizing graph instruction tuning and preference alignment. The tool collects and decomposes 29 standard graph datasets into four groups, enabling LLMs to better understand and generate graph data. It introduces a structured format verbalizer to transform graph data into a code-like format, facilitating code understanding and generation. Additionally, it addresses hallucination problems in graph reasoning and generation through direct preference optimization (DPO). The tool aims to bridge the gap between textual LLMs and graph data, offering a comprehensive solution for graph-related tasks.
FedLLM-Bench
FedLLM-Bench is a realistic benchmark for the Federated Learning of Large Language Models community. It includes datasets for federated instruction tuning and preference alignment tasks, exhibiting diversities in language, quality, quantity, instruction, sequence length, embedding, and preference. The repository provides training scripts and code for open-ended evaluation, aiming to facilitate research and development in federated learning of large language models.
instruct-ner
Instruct NER is a solution for complex Named Entity Recognition tasks, including Nested NER, based on modern Large Language Models (LLMs). It provides tools for dataset creation, training, automatic metric calculation, inference, error analysis, and model implementation. Users can create instructions for LLM, build dictionaries with labels, and generate model input templates. The tool supports various entity types and datasets, such as RuDReC, NEREL-BIO, CoNLL-2003, and MultiCoNER II. It offers training scripts for LLMs and metric calculation functions. Instruct NER models like Llama, Mistral, T5, and RWKV are implemented, with HuggingFace models available for adaptation and merging.
pycm
PyCM is a Python library for multi-class confusion matrices, providing support for input data vectors and direct matrices. It is a comprehensive tool for post-classification model evaluation, offering a wide range of metrics for predictive models and accurate evaluation of various classifiers. PyCM is designed for data scientists who require diverse metrics for their models.
model_server
OpenVINOâ„¢ Model Server (OVMS) is a high-performance system for serving models. Implemented in C++ for scalability and optimized for deployment on Intel architectures, the model server uses the same architecture and API as TensorFlow Serving and KServe while applying OpenVINO for inference execution. Inference service is provided via gRPC or REST API, making deploying new algorithms and AI experiments easy.
TaskingAI
TaskingAI brings Firebase's simplicity to **AI-native app development**. The platform enables the creation of GPTs-like multi-tenant applications using a wide range of LLMs from various providers. It features distinct, modular functions such as Inference, Retrieval, Assistant, and Tool, seamlessly integrated to enhance the development process. TaskingAI’s cohesive design ensures an efficient, intelligent, and user-friendly experience in AI application development.
MathCoder
MathCoder is a repository focused on enhancing mathematical reasoning by fine-tuning open-source language models to use code for modeling and deriving math equations. It introduces MathCodeInstruct dataset with solutions interleaving natural language, code, and execution results. The repository provides MathCoder models capable of generating code-based solutions for challenging math problems, achieving state-of-the-art scores on MATH and GSM8K datasets. It offers tools for model deployment, inference, and evaluation, along with a citation for referencing the work.
For similar jobs
weave
Weave is a toolkit for developing Generative AI applications, built by Weights & Biases. With Weave, you can log and debug language model inputs, outputs, and traces; build rigorous, apples-to-apples evaluations for language model use cases; and organize all the information generated across the LLM workflow, from experimentation to evaluations to production. Weave aims to bring rigor, best-practices, and composability to the inherently experimental process of developing Generative AI software, without introducing cognitive overhead.
LLMStack
LLMStack is a no-code platform for building generative AI agents, workflows, and chatbots. It allows users to connect their own data, internal tools, and GPT-powered models without any coding experience. LLMStack can be deployed to the cloud or on-premise and can be accessed via HTTP API or triggered from Slack or Discord.
VisionCraft
The VisionCraft API is a free API for using over 100 different AI models. From images to sound.
kaito
Kaito is an operator that automates the AI/ML inference model deployment in a Kubernetes cluster. It manages large model files using container images, avoids tuning deployment parameters to fit GPU hardware by providing preset configurations, auto-provisions GPU nodes based on model requirements, and hosts large model images in the public Microsoft Container Registry (MCR) if the license allows. Using Kaito, the workflow of onboarding large AI inference models in Kubernetes is largely simplified.
PyRIT
PyRIT is an open access automation framework designed to empower security professionals and ML engineers to red team foundation models and their applications. It automates AI Red Teaming tasks to allow operators to focus on more complicated and time-consuming tasks and can also identify security harms such as misuse (e.g., malware generation, jailbreaking), and privacy harms (e.g., identity theft). The goal is to allow researchers to have a baseline of how well their model and entire inference pipeline is doing against different harm categories and to be able to compare that baseline to future iterations of their model. This allows them to have empirical data on how well their model is doing today, and detect any degradation of performance based on future improvements.
tabby
Tabby is a self-hosted AI coding assistant, offering an open-source and on-premises alternative to GitHub Copilot. It boasts several key features: * Self-contained, with no need for a DBMS or cloud service. * OpenAPI interface, easy to integrate with existing infrastructure (e.g Cloud IDE). * Supports consumer-grade GPUs.
spear
SPEAR (Simulator for Photorealistic Embodied AI Research) is a powerful tool for training embodied agents. It features 300 unique virtual indoor environments with 2,566 unique rooms and 17,234 unique objects that can be manipulated individually. Each environment is designed by a professional artist and features detailed geometry, photorealistic materials, and a unique floor plan and object layout. SPEAR is implemented as Unreal Engine assets and provides an OpenAI Gym interface for interacting with the environments via Python.
Magick
Magick is a groundbreaking visual AIDE (Artificial Intelligence Development Environment) for no-code data pipelines and multimodal agents. Magick can connect to other services and comes with nodes and templates well-suited for intelligent agents, chatbots, complex reasoning systems and realistic characters.

