Best AI tools for< Ontology Specialist >
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10 - AI tool Sites

Fuel50
Fuel50 is an AI Talent Marketplace that offers personalized skill development paths and growth opportunities for employees. It leverages expert-driven skills ontology to align individual aspirations with organizational goals, enhance internal mobility, boost employee engagement, and increase retention. Fuel50 provides deep insights into workforce capabilities, enabling data-driven decisions for creating agile, resilient teams. The platform offers features like automated skill to role mapping, talent allocation, employee-driven career pathways, and holistic employee growth.

Context Data
Context Data is an enterprise data platform designed for Generative AI applications. It enables organizations to build AI apps without the need to manage vector databases, pipelines, and infrastructure. The platform empowers AI teams to create mission-critical applications by simplifying the process of building and managing complex workflows. Context Data also provides real-time data processing capabilities and seamless vector data processing. It offers features such as data catalog ontology, semantic transformations, and the ability to connect to major vector databases. The platform is ideal for industries like financial services, healthcare, real estate, and shipping & supply chain.

BioXcel Therapeutics
BioXcel Therapeutics, Inc. is a clinical-stage biopharmaceutical company developing transformative medicines in neuroscience and immuno-oncology utilizing artificial intelligence, or AI, techniques. The company's proprietary AI platform is used to identify, re-innovate, and develop potential new therapies. BioXcel Therapeutics has a pipeline of product candidates in various stages of development, including BXCL501 for agitation in dementia, BXCL701 for cocaine use disorder, and BXCL801 for acute suicidal ideation and behavior in patients with major depressive disorder.

Derwen
Derwen is an open-source integration platform for production machine learning in enterprise, specializing in natural language processing, graph technologies, and decision support. It offers expertise in developing knowledge graph applications and domain-specific authoring. Derwen collaborates closely with Hugging Face and provides strong data privacy guarantees, low carbon footprint, and no cloud vendor involvement. The platform aims to empower AI engineers and domain experts with quality, time-to-value, and ownership since 2017.

Oncora Medical
Oncora Medical is an AI-powered platform that revolutionizes oncology care management. The platform offers a Clinical Data Platform for automating document generation and enhancing registry informatics. It provides AI-enabled case findings, revenue cycle management solutions, and cancer registry automation. Oncora's comprehensive AI solutions streamline workflows, improve outcomes, and capture revenue through intelligent automation. Trusted by top healthcare organizations worldwide, Oncora empowers healthcare organizations to achieve remarkable results in oncology care.

Oatmeal Health
Oatmeal Health is an AI-enabled cancer screening and clinical trials platform designed to support Community Health Centers and improve patient outcomes. By seamlessly integrating AI technology with dedicated virtual care teams, Oatmeal Health facilitates evidence-based cancer screenings, care navigation, and diagnostic screenings to enhance value-based revenue and quality metrics. The platform aims to prevent late-stage cancer by providing early diagnosis and personalized risk assessments, ultimately saving lives and reducing the overall cost of cancer care.

Accuray
Accuray Incorporated is a radiation oncology company that develops, manufactures, and sells radiation therapy systems and software for the treatment of cancer. Accuray's products are used by radiation oncologists to deliver precise and effective radiation therapy treatments to patients with a variety of cancers, including prostate cancer, breast cancer, lung cancer, and brain cancer. Accuray's mission is to expand the curative power of radiation therapy to improve as many lives as possible.

Oncora Medical
Oncora Medical is a healthcare technology company that provides software and data solutions to oncologists and cancer centers. Their products are designed to improve patient care, reduce clinician burnout, and accelerate clinical discoveries. Oncora's flagship product, Oncora Patient Care, is a modern, intelligent user interface for oncologists that simplifies workflow, reduces documentation burden, and optimizes treatment decision making. Oncora Analytics is an adaptive visual and backend software platform for regulatory-grade real world data analytics. Oncora Registry is a platform to capture and report quality data, treatment data, and outcomes data in the oncology space.

Insitro
Insitro is a drug discovery and development company that uses machine learning and data to identify and develop new medicines. The company's platform integrates in vitro cellular data produced in its labs with human clinical data to help redefine disease. Insitro's pipeline includes wholly-owned and partnered therapeutic programs in metabolism, oncology, and neuroscience.

InformAI
InformAI is a technology company dedicated to advancing healthcare through the development of AI-driven solutions. We focus on crafting high-quality, AI-driven enterprise software solutions that address specific clinical needs. We target critical medical fields including radiology, radiation oncology, and high acuity informatics. Our portfolio, featuring our flagship RadOncAI and our development pipeline products of SinusAI and TransplantAI, is designed to deliver impactful solutions that enhance healthcare quality, safety and efficiency.
20 - Open Source Tools

MedLLMsPracticalGuide
This repository serves as a practical guide for Medical Large Language Models (Medical LLMs) and provides resources, surveys, and tools for building, fine-tuning, and utilizing LLMs in the medical domain. It covers a wide range of topics including pre-training, fine-tuning, downstream biomedical tasks, clinical applications, challenges, future directions, and more. The repository aims to provide insights into the opportunities and challenges of LLMs in medicine and serve as a practical resource for constructing effective medical LLMs.

KG-LLM-Papers
KG-LLM-Papers is a repository that collects papers integrating knowledge graphs (KGs) and large language models (LLMs). It serves as a comprehensive resource for research on the role of KGs in the era of LLMs, covering surveys, methods, and resources related to this integration.

LLM-Agents-Papers
A repository that lists papers related to Large Language Model (LLM) based agents. The repository covers various topics including survey, planning, feedback & reflection, memory mechanism, role playing, game playing, tool usage & human-agent interaction, benchmark & evaluation, environment & platform, agent framework, multi-agent system, and agent fine-tuning. It provides a comprehensive collection of research papers on LLM-based agents, exploring different aspects of AI agent architectures and applications.

BambooAI
BambooAI is a lightweight library utilizing Large Language Models (LLMs) to provide natural language interaction capabilities, much like a research and data analysis assistant enabling conversation with your data. You can either provide your own data sets, or allow the library to locate and fetch data for you. It supports Internet searches and external API interactions.

LLM-for-Healthcare
The repository 'LLM-for-Healthcare' provides a comprehensive survey of large language models (LLMs) for healthcare, covering data, technology, applications, and accountability and ethics. It includes information on various LLM models, training data, evaluation methods, and computation costs. The repository also discusses tasks such as NER, text classification, question answering, dialogue systems, and generation of medical reports from images in the healthcare domain.

awesome-open-data-annotation
At ZenML, we believe in the importance of annotation and labeling workflows in the machine learning lifecycle. This repository showcases a curated list of open-source data annotation and labeling tools that are actively maintained and fit for purpose. The tools cover various domains such as multi-modal, text, images, audio, video, time series, and other data types. Users can contribute to the list and discover tools for tasks like named entity recognition, data annotation for machine learning, image and video annotation, text classification, sequence labeling, object detection, and more. The repository aims to help users enhance their data-centric workflows by leveraging these tools.

LLMEvaluation
The LLMEvaluation repository is a comprehensive compendium of evaluation methods for Large Language Models (LLMs) and LLM-based systems. It aims to assist academics and industry professionals in creating effective evaluation suites tailored to their specific needs by reviewing industry practices for assessing LLMs and their applications. The repository covers a wide range of evaluation techniques, benchmarks, and studies related to LLMs, including areas such as embeddings, question answering, multi-turn dialogues, reasoning, multi-lingual tasks, ethical AI, biases, safe AI, code generation, summarization, software performance, agent LLM architectures, long text generation, graph understanding, and various unclassified tasks. It also includes evaluations for LLM systems in conversational systems, copilots, search and recommendation engines, task utility, and verticals like healthcare, law, science, financial, and others. The repository provides a wealth of resources for evaluating and understanding the capabilities of LLMs in different domains.

GraphRAG-SDK
Build fast and accurate GenAI applications with GraphRAG SDK, a specialized toolkit for building Graph Retrieval-Augmented Generation (GraphRAG) systems. It integrates knowledge graphs, ontology management, and state-of-the-art LLMs to deliver accurate, efficient, and customizable RAG workflows. The SDK simplifies the development process by automating ontology creation, knowledge graph agent creation, and query handling, enabling users to interact and query their knowledge graphs effectively. It supports multi-agent systems and orchestrates agents specialized in different domains. The SDK is optimized for FalkorDB, ensuring high performance and scalability for large-scale applications. By leveraging knowledge graphs, it enables semantic relationships and ontology-driven queries that go beyond standard vector similarity, enhancing retrieval-augmented generation capabilities.

awesome-ai-llm4education
The 'awesome-ai-llm4education' repository is a curated list of papers related to artificial intelligence (AI) and large language models (LLM) for education. It collects papers from top conferences, journals, and specialized domain-specific conferences, categorizing them based on specific tasks for better organization. The repository covers a wide range of topics including tutoring, personalized learning, assessment, material preparation, specific scenarios like computer science, language, math, and medicine, aided teaching, as well as datasets and benchmarks for educational research.

ai-audio-datasets
AI Audio Datasets List (AI-ADL) is a comprehensive collection of datasets consisting of speech, music, and sound effects, used for Generative AI, AIGC, AI model training, and audio applications. It includes datasets for speech recognition, speech synthesis, music information retrieval, music generation, audio processing, sound synthesis, and more. The repository provides a curated list of diverse datasets suitable for various AI audio tasks.

Scientific-LLM-Survey
Scientific Large Language Models (Sci-LLMs) is a repository that collects papers on scientific large language models, focusing on biology and chemistry domains. It includes textual, molecular, protein, and genomic languages, as well as multimodal language. The repository covers various large language models for tasks such as molecule property prediction, interaction prediction, protein sequence representation, protein sequence generation/design, DNA-protein interaction prediction, and RNA prediction. It also provides datasets and benchmarks for evaluating these models. The repository aims to facilitate research and development in the field of scientific language modeling.

automatic-KG-creation-with-LLM
This repository presents a (semi-)automatic pipeline for Ontology and Knowledge Graph Construction using Large Language Models (LLMs) such as Mixtral 8x22B Instruct v0.1, GPT-4o, GPT-3.5, and Gemini. It explores the generation of Knowledge Graphs by formulating competency questions, developing ontologies, constructing KGs, and evaluating the results with minimal human involvement. The project showcases the creation of a KG on deep learning methodologies from scholarly publications. It includes components for data preprocessing, prompts for LLMs, datasets, and results from the selected LLMs.

curate-gpt
CurateGPT is a prototype web application and framework for performing general purpose AI-guided curation and curation-related operations over collections of objects. It allows users to load JSON, YAML, or CSV data, build vector database indexes for ontologies, and interact with various data sources like GitHub, Google Drives, Google Sheets, and more. The tool supports ontology curation, knowledge base querying, term autocompletion, and all-by-all comparisons for objects in a collection.

ontogpt
OntoGPT is a Python package for extracting structured information from text using large language models, instruction prompts, and ontology-based grounding. It provides a command line interface and a minimal web app for easy usage. The tool has been evaluated on test data and is used in related projects like TALISMAN for gene set analysis. OntoGPT enables users to extract information from text by specifying relevant terms and provides the extracted objects as output.

Docs2KG
Docs2KG is a tool designed for constructing a unified knowledge graph from heterogeneous documents. It addresses the challenges of digitizing diverse unstructured documents and constructing a high-quality knowledge graph with less effort. The tool combines bottom-up and top-down approaches, utilizing a human-LLM collaborative interface to enhance the generated knowledge graph. It organizes the knowledge graph into MetaKG, LayoutKG, and SemanticKG, providing a comprehensive view of document content. Docs2KG aims to streamline the process of knowledge graph construction and offers metrics for evaluating the quality of automatic construction.
9 - OpenAI Gpts

Oncology Clinical Trial Navigator
Find active recruiting oncology clinical trials near you.

EnggBott (Construction Work Package Assistant)
I organize my thoughts using ontology matrices, for detailed CWP advice.

Superläraren
An expert in ontology, epistemology, and the Swedish education system, responding in Swedish.

Cancer Clinical Trial Matching - DrArturoAI
Expert in oncology trial matching, leveraging advanced GPT-4 Turbo techniques.