
Open-Medical-Reasoning-Tasks
A comprehensive repository of reasoning tasks for Medical LLMs (and beyond)
Stars: 80

Open Life Science AI: Medical Reasoning Tasks is a collaborative hub for developing cutting-edge reasoning tasks for Large Language Models (LLMs) in the medical, healthcare, and clinical domains. The repository aims to advance AI capabilities in healthcare by fostering accurate diagnoses, personalized treatments, and improved patient outcomes. It offers a diverse range of medical reasoning challenges such as Diagnostic Reasoning, Treatment Planning, Medical Image Analysis, Clinical Data Interpretation, Patient History Analysis, Ethical Decision Making, Medical Literature Comprehension, and Drug Interaction Assessment. Contributors can join the community of healthcare professionals, AI researchers, and enthusiasts to contribute to the repository by creating new tasks or improvements following the provided guidelines. The repository also provides resources including a task list, evaluation metrics, medical AI papers, and healthcare datasets for training and evaluation.
README:
Advancing AI in Healthcare through Collaborative Task Development
Image Source: Can large language models reason about medical questions?
Welcome to the frontier of medical AI! This repository is a collaborative hub for developing cutting-edge reasoning tasks for Large Language Models (LLMs) in the medical, healthcare, and clinical domains.
Our Mission: To push the boundaries of AI capabilities in healthcare, fostering more accurate diagnoses, personalized treatments, and improved patient outcomes.
Explore our diverse range of medical reasoning challenges (Not limited to):
- Diagnostic Reasoning
- Treatment Planning
- Medical Image Analysis
- Clinical Data Interpretation
- Patient History Analysis
- Ethical Decision Making
- Medical Literature Comprehension
- Drug Interaction Assessment
- More to come
We believe in the power of collective intelligence. Join our community of healthcare professionals, AI researchers, and enthusiasts!
To contribute, please use GitHub and follow these guidelines. If you're not familiar with GitHub, don't worry! You can use this Google form to submit your tasks. Make sure to check the example provided to ensure all information is filled out correctly.
With Github:
- Fork this repository
- Create a new branch for your task or improvement
- Add your contribution following our guidelines
- Submit a pull request
Detailed instructions available in our Contribution Guide.
- 📋 Task List: Comprehensive list of medical reasoning tasks
- 📏 Evaluation Metrics: Assessing LLM performance in healthcare
- 📖 Medical AI Papers: Curated list of groundbreaking research
- 🗄️ Healthcare Datasets: High-quality data for training and evaluation
/
├── 📁 tasks/
│ ├── 🔬 diagnostic-reasoning/
│ ├── 💊 treatment-planning/
│ ├── 🖼️ medical-image-analysis/
│ └── ...
├── 📁 examples/
├── 📁 resources/
├── 📁 guidelines/
├── 📁 evaluation/
├── 📜 LICENSE
└── 📘 README.md
This project is licensed under the MIT License.
If our work contributes to your research, please cite us:
@misc{medicalreasoningtasks,
title = {Open Medical Reasoning Tasks: A Comprehensive Collection of LLM Reasoning Tasks in Healthcare},
author = {Pal, Ankit and Open Life Science AI team},
url = {https://github.com/OpenLifeScienceAI/Medical-Reasoning-Tasks},
year = {2024},
}
Join us in revolutionizing healthcare with AI!
For Tasks:
Click tags to check more tools for each tasksFor Jobs:
Alternative AI tools for Open-Medical-Reasoning-Tasks
Similar Open Source Tools

Open-Medical-Reasoning-Tasks
Open Life Science AI: Medical Reasoning Tasks is a collaborative hub for developing cutting-edge reasoning tasks for Large Language Models (LLMs) in the medical, healthcare, and clinical domains. The repository aims to advance AI capabilities in healthcare by fostering accurate diagnoses, personalized treatments, and improved patient outcomes. It offers a diverse range of medical reasoning challenges such as Diagnostic Reasoning, Treatment Planning, Medical Image Analysis, Clinical Data Interpretation, Patient History Analysis, Ethical Decision Making, Medical Literature Comprehension, and Drug Interaction Assessment. Contributors can join the community of healthcare professionals, AI researchers, and enthusiasts to contribute to the repository by creating new tasks or improvements following the provided guidelines. The repository also provides resources including a task list, evaluation metrics, medical AI papers, and healthcare datasets for training and evaluation.

magic
Magic is an open-source all-in-one AI productivity platform designed to help enterprises quickly build and deploy AI applications, aiming for a 100x increase in productivity. It consists of various AI products and infrastructure tools, such as Super Magic, Magic IM, Magic Flow, and more. Super Magic is a general-purpose AI Agent for complex task scenarios, while Magic Flow is a visual AI workflow orchestration system. Magic IM is an enterprise-grade AI Agent conversation system for internal knowledge management. Teamshare OS is a collaborative office platform integrating AI capabilities. The platform provides cloud services, enterprise solutions, and a self-hosted community edition for users to leverage its features.

AReaL
AReaL (Ant Reasoning RL) is an open-source reinforcement learning system developed at the RL Lab, Ant Research. It is designed for training Large Reasoning Models (LRMs) in a fully open and inclusive manner. AReaL provides reproducible experiments for 1.5B and 7B LRMs, showcasing its scalability and performance across diverse computational budgets. The system follows an iterative training process to enhance model performance, with a focus on mathematical reasoning tasks. AReaL is equipped to adapt to different computational resource settings, enabling users to easily configure and launch training trials. Future plans include support for advanced models, optimizations for distributed training, and exploring research topics to enhance LRMs' reasoning capabilities.

ai-platform-engineering
The AI Platform Engineering repository provides a collection of tools and resources for building and deploying AI models. It includes libraries for data preprocessing, model training, and model serving. The repository also contains example code and tutorials to help users get started with AI development. Whether you are a beginner or an experienced AI engineer, this repository offers valuable insights and best practices to streamline your AI projects.

wanwu
Wanwu AI Agent Platform is an enterprise-grade one-stop commercially friendly AI agent development platform designed for business scenarios. It provides enterprises with a safe, efficient, and compliant one-stop AI solution. The platform integrates cutting-edge technologies such as large language models and business process automation to build an AI engineering platform covering model full life-cycle management, MCP, web search, AI agent rapid development, enterprise knowledge base construction, and complex workflow orchestration. It supports modular architecture design, flexible functional expansion, and secondary development, reducing the application threshold of AI technology while ensuring security and privacy protection of enterprise data. It accelerates digital transformation, cost reduction, efficiency improvement, and business innovation for enterprises of all sizes.

slime
Slime is an LLM post-training framework for RL scaling that provides high-performance training and flexible data generation capabilities. It connects Megatron with SGLang for efficient training and enables custom data generation workflows through server-based engines. The framework includes modules for training, rollout, and data buffer management, offering a comprehensive solution for RL scaling.

griptape
Griptape is a modular Python framework for building AI-powered applications that securely connect to your enterprise data and APIs. It offers developers the ability to maintain control and flexibility at every step. Griptape's core components include Structures (Agents, Pipelines, and Workflows), Tasks, Tools, Memory (Conversation Memory, Task Memory, and Meta Memory), Drivers (Prompt and Embedding Drivers, Vector Store Drivers, Image Generation Drivers, Image Query Drivers, SQL Drivers, Web Scraper Drivers, and Conversation Memory Drivers), Engines (Query Engines, Extraction Engines, Summary Engines, Image Generation Engines, and Image Query Engines), and additional components (Rulesets, Loaders, Artifacts, Chunkers, and Tokenizers). Griptape enables developers to create AI-powered applications with ease and efficiency.

AI6127
AI6127 is a course focusing on deep neural networks for natural language processing (NLP). It covers core NLP tasks and machine learning models, emphasizing deep learning methods using libraries like Pytorch. The course aims to teach students state-of-the-art techniques for practical NLP problems, including writing, debugging, and training deep neural models. It also explores advancements in NLP such as Transformers and ChatGPT.

suna
Kortix is an open-source platform designed to build, manage, and train AI agents for various tasks. It allows users to create autonomous agents, from general-purpose assistants to specialized automation tools. The platform offers capabilities such as browser automation, file management, web intelligence, system operations, API integrations, and agent building tools. Users can create custom agents tailored to specific domains, workflows, or business needs, enabling tasks like research & analysis, browser automation, file & document management, data processing & analysis, and system administration.

dapr-agents
Dapr Agents is a developer framework for building production-grade resilient AI agent systems that operate at scale. It enables software developers to create AI agents that reason, act, and collaborate using Large Language Models (LLMs), while providing built-in observability and stateful workflow execution to ensure agentic workflows complete successfully. The framework is scalable, efficient, Kubernetes-native, data-driven, secure, observable, vendor-neutral, and open source. It offers features like scalable workflows, cost-effective AI adoption, data-centric AI agents, accelerated development, integrated security and reliability, built-in messaging and state infrastructure, and vendor-neutral and open source support. Dapr Agents is designed to simplify the development of AI applications and workflows by providing a comprehensive API surface and seamless integration with various data sources and services.

kaizen
Kaizen is an open-source project that helps teams ensure quality in their software delivery by providing a suite of tools for code review, test generation, and end-to-end testing. It integrates with your existing code repositories and workflows, allowing you to streamline your software development process. Kaizen generates comprehensive end-to-end tests, provides UI testing and review, and automates code review with insightful feedback. The file structure includes components for API server, logic, actors, generators, LLM integrations, documentation, and sample code. Getting started involves installing the Kaizen package, generating tests for websites, and executing tests. The tool also runs an API server for GitHub App actions. Contributions are welcome under the AGPL License.

ScholarCopilot
Scholar Copilot is an intelligent academic writing assistant that enhances the research writing process through AI-powered text completion and citation suggestions. It aims to streamline academic writing while maintaining high scholarly standards. The tool provides features such as smart text generation with next-3-sentence suggestions, full section auto-completion, and context-aware writing. It also offers intelligent citation management with real-time citation suggestions, one-click citation insertion, and citation Bibtex generation. Scholar Copilot employs a unified model architecture that integrates retrieval and generation through a dynamic switching mechanism, ensuring coherent text generation with appropriate citation points.

ClicShopping
ClicShopping AI™ is an open-source Ecommerce platform powered by Generative AI, designed for B2B, B2C, and B2B-B2C businesses. It offers seamless shopping experiences, advanced AI integration, modular architecture for customization, and responsive design across devices. With features like GPT API integration, RAG-powered Business Intelligence Agent, multi-model AI support, and security compliance, ClicShopping AI™ is a comprehensive solution for online businesses. It also provides internationalization support, performance analytics, server performance optimization, content management, API connections, shipping and payment options, and a marketplace for additional modules and apps.

policy-synth
Policy Synth is a TypeScript class library that empowers better decision-making for governments and companies by integrating collective and artificial intelligence. It streamlines processes through multi-scale AI agent logic flows, robust APIs, and cutting-edge real-time AI-driven web applications. The tool supports organizations in generating, refining, and implementing smarter, data-informed strategies, fostering collaboration with AI to tackle complex challenges effectively.

Conversation-Knowledge-Mining-Solution-Accelerator
The Conversation Knowledge Mining Solution Accelerator enables customers to leverage intelligence to uncover insights, relationships, and patterns from conversational data. It empowers users to gain valuable knowledge and drive targeted business impact by utilizing Azure AI Foundry, Azure OpenAI, Microsoft Fabric, and Azure Search for topic modeling, key phrase extraction, speech-to-text transcription, and interactive chat experiences.
For similar tasks

Open-Medical-Reasoning-Tasks
Open Life Science AI: Medical Reasoning Tasks is a collaborative hub for developing cutting-edge reasoning tasks for Large Language Models (LLMs) in the medical, healthcare, and clinical domains. The repository aims to advance AI capabilities in healthcare by fostering accurate diagnoses, personalized treatments, and improved patient outcomes. It offers a diverse range of medical reasoning challenges such as Diagnostic Reasoning, Treatment Planning, Medical Image Analysis, Clinical Data Interpretation, Patient History Analysis, Ethical Decision Making, Medical Literature Comprehension, and Drug Interaction Assessment. Contributors can join the community of healthcare professionals, AI researchers, and enthusiasts to contribute to the repository by creating new tasks or improvements following the provided guidelines. The repository also provides resources including a task list, evaluation metrics, medical AI papers, and healthcare datasets for training and evaluation.
For similar jobs

weave
Weave is a toolkit for developing Generative AI applications, built by Weights & Biases. With Weave, you can log and debug language model inputs, outputs, and traces; build rigorous, apples-to-apples evaluations for language model use cases; and organize all the information generated across the LLM workflow, from experimentation to evaluations to production. Weave aims to bring rigor, best-practices, and composability to the inherently experimental process of developing Generative AI software, without introducing cognitive overhead.

LLMStack
LLMStack is a no-code platform for building generative AI agents, workflows, and chatbots. It allows users to connect their own data, internal tools, and GPT-powered models without any coding experience. LLMStack can be deployed to the cloud or on-premise and can be accessed via HTTP API or triggered from Slack or Discord.

VisionCraft
The VisionCraft API is a free API for using over 100 different AI models. From images to sound.

kaito
Kaito is an operator that automates the AI/ML inference model deployment in a Kubernetes cluster. It manages large model files using container images, avoids tuning deployment parameters to fit GPU hardware by providing preset configurations, auto-provisions GPU nodes based on model requirements, and hosts large model images in the public Microsoft Container Registry (MCR) if the license allows. Using Kaito, the workflow of onboarding large AI inference models in Kubernetes is largely simplified.

PyRIT
PyRIT is an open access automation framework designed to empower security professionals and ML engineers to red team foundation models and their applications. It automates AI Red Teaming tasks to allow operators to focus on more complicated and time-consuming tasks and can also identify security harms such as misuse (e.g., malware generation, jailbreaking), and privacy harms (e.g., identity theft). The goal is to allow researchers to have a baseline of how well their model and entire inference pipeline is doing against different harm categories and to be able to compare that baseline to future iterations of their model. This allows them to have empirical data on how well their model is doing today, and detect any degradation of performance based on future improvements.

tabby
Tabby is a self-hosted AI coding assistant, offering an open-source and on-premises alternative to GitHub Copilot. It boasts several key features: * Self-contained, with no need for a DBMS or cloud service. * OpenAPI interface, easy to integrate with existing infrastructure (e.g Cloud IDE). * Supports consumer-grade GPUs.

spear
SPEAR (Simulator for Photorealistic Embodied AI Research) is a powerful tool for training embodied agents. It features 300 unique virtual indoor environments with 2,566 unique rooms and 17,234 unique objects that can be manipulated individually. Each environment is designed by a professional artist and features detailed geometry, photorealistic materials, and a unique floor plan and object layout. SPEAR is implemented as Unreal Engine assets and provides an OpenAI Gym interface for interacting with the environments via Python.

Magick
Magick is a groundbreaking visual AIDE (Artificial Intelligence Development Environment) for no-code data pipelines and multimodal agents. Magick can connect to other services and comes with nodes and templates well-suited for intelligent agents, chatbots, complex reasoning systems and realistic characters.