Best AI tools for< Clinical Data Scientist >

Oncora Medical is a healthcare technology company that provides software and data solutions to oncologists and cancer centers. Their products are designed to improve patient care, reduce clinician burnout, and accelerate clinical discoveries. Oncora's flagship product, Oncora Patient Care, is a modern, intelligent user interface for oncologists that simplifies workflow, reduces documentation burden, and optimizes treatment decision making. Oncora Analytics is an adaptive visual and backend software platform for regulatory-grade real world data analytics. Oncora Registry is a platform to capture and report quality data, treatment data, and outcomes data in the oncology space.

Insitro is a drug discovery and development company that uses machine learning and data to identify and develop new medicines. The company's platform integrates in vitro cellular data produced in its labs with human clinical data to help redefine disease. Insitro's pipeline includes wholly-owned and partnered therapeutic programs in metabolism, oncology, and neuroscience.

The website OpenLife.ai is an AI tool that focuses on various aspects of healthcare, including medical AI, ambient clinical intelligence, clinical documentation integrity, healthcare analytics, patient engagement, radiology solutions, and more. It offers insights, news, and resources related to the application of artificial intelligence in the healthcare industry.

JADBio is an automated machine learning (AutoML) platform designed to accelerate biomarker discovery and drug development processes. It offers a no-code solution that automates the discovery of biomarkers and interprets their role based on research needs. JADBio can parse multi-omics data, including genomics, transcriptome, metagenome, proteome, metabolome, phenotype/clinical data, and images, enabling users to efficiently discover valuable insights. The platform is purpose-built for various conditions such as cancer, immune, endocrine, metabolic system, chronic diseases, aging, infectious diseases, and mental health, offering solutions for early biomarker discovery, drug repurposing, lead identification, compound optimization, trial monitoring, and response to treatment. JADBio is trusted by partners in precision health & medicine and is continuously evolving to disrupt drug discovery times and costs at all stages.

Intelligent Health is the world's leading AI in medicine summit series dedicated to saving lives with AI. The platform hosts a healthtech community committed to advancing pivotal conversations on AI in medicine and fostering global collaboration across the healthcare sector. With a comprehensive agenda offering access to expert voices, Intelligent Health expedites critical discussions on challenges, solutions, and innovations to facilitate key decision-making and impactful investments. The platform aims to ensure the safe, effective, and democratic adoption of AI in healthcare to improve global health outcomes for all.

Tempus is an AI-enabled precision medicine company that brings the power of data and artificial intelligence to healthcare. With the power of AI, Tempus accelerates the discovery of novel targets, predicts the effectiveness of treatments, identifies potentially life-saving clinical trials, and diagnoses multiple diseases earlier. Tempus's innovative technology includes ONE, an AI-enabled clinical assistant; NEXT, a tool to identify and close gaps in care; LENS, a platform to find, access, and analyze multimodal real-world data; and ALGOS, algorithmic models connected to Tempus's assays to provide additional insight.

Tempus is an AI-enabled precision medicine company that brings the power of data and artificial intelligence to healthcare. With the power of AI, Tempus accelerates the discovery of novel targets, predicts the effectiveness of treatments, identifies potentially life-saving clinical trials, and diagnoses multiple diseases earlier. Tempus' innovative technology includes ONE, an AI-enabled clinical assistant; NEXT, which identifies and closes gaps in care; LENS, which finds, accesses, and analyzes multimodal real-world data; and ALGOS, algorithmic models connected to Tempus' assays to provide additional insight.

Komodo Health is a healthcare technology company that provides software applications to enable users to deliver exceptional value to their customers, colleagues, and patients. The company's Healthcare Map is the industry's most precise view of the U.S. healthcare system, and it combines the world's most comprehensive view of patient-encounters with innovative algorithms and decades of clinical expertise. Komodo Health's software applications are used by life sciences companies, payers, providers, and consultancies to improve the certainty of pre-launch plans, calculate Rx-based ROI for digital marketing, find patients with complicated or rare conditions, and more.

Unlearn.ai is an AI-powered digital twins solution provider that optimizes clinical trials. Their TwinRCTs enable confident and quick clinical trials in various medical fields such as neuroscience, immunology, and metabolic diseases. By creating digital twins of patients, Unlearn.ai enhances the power and efficiency of clinical trials, attracting study participants and making confident decisions from early to late-stage studies.

The National Cancer Institute's Center for Biomedical Informatics and Information Technology (CBIIT) provides a comprehensive suite of tools, resources, and training to support cancer data science research. These resources include data repositories, analytical tools, data standards, and training materials. CBIIT also develops and maintains the NCI Thesaurus, a comprehensive vocabulary of cancer-related terms, and the Cancer Data Standards Registry and Repository (caDSR), a repository of cancer data standards. CBIIT's mission is to accelerate the pace of cancer research by providing researchers with the tools and resources they need to access, analyze, and share cancer data.

CloudMedx is a healthcare data platform that provides aggregation, automation, and AI solutions. It simplifies decision making for patients, providers, and payers with a single powerful platform. Clinical, operations, and financial results are coordinated and delivered like never before.

Intelligencia AI is a leading provider of AI-powered solutions for the pharmaceutical industry. Our suite of solutions helps de-risk and enhance clinical development and decision-making. We use a combination of data, AI, and machine learning to provide insights into the probability of success for drugs across multiple therapeutic areas. Our solutions are used by many of the top global pharmaceutical companies to improve their R&D productivity and make more informed decisions.

ClosedLoop is a healthcare data science platform that helps organizations improve outcomes and reduce unnecessary costs with accurate, explainable, and actionable predictions of individual-level health risks. The platform provides a comprehensive library of easily modifiable templates for healthcare-specific predictive models, machine learning (ML) features, queries, and data transformation, which accelerates time to value. ClosedLoop's AI/ML platform is designed exclusively for the data science needs of modern healthcare organizations and helps deliver measurable clinical and financial impact.

Beacon Biosignals provides an EEG neurobiomarker platform that is designed to accelerate clinical trials and enable new treatments for patients with neurological and psychiatric diseases. Their platform is powered by machine learning and a world-class clinico-EEG database, which allows them to analyze existing EEG data for insights into mechanisms, PK/PD, and patient stratification. This information can be used to guide further development efforts, optimize clinical trials, and enhance understanding of treatment efficacy.

BenevolentAI is a leader in applying advanced AI to accelerate biopharma drug discovery blending science and technology with a focus on finding solutions for complex diseases. We empower both biopharmaceutical companies and our internal scientists to harness the full potential of data and AI to accelerate the next generation of scientific advances. We have built our AI-enabled drug discovery engine to drive a revolution in drug discovery. The Benevolent Platform™ unlocks the power of a vast biomedical data landscape to provide a multidimensional representation of human biology across all diseases. We believe this approach will improve the probability of clinical success, and help us deliver life-changing treatments to patients – because it matters.

JMIR AI is a new peer-reviewed journal focused on research and applications for the health artificial intelligence (AI) community. It includes contemporary developments as well as historical examples, with an emphasis on sound methodological evaluations of AI techniques and authoritative analyses. It is intended to be the main source of reliable information for health informatics professionals to learn about how AI techniques can be applied and evaluated.

BioXcel Therapeutics, Inc. is a clinical-stage biopharmaceutical company developing transformative medicines in neuroscience and immuno-oncology utilizing artificial intelligence, or AI, techniques. The company's proprietary AI platform is used to identify, re-innovate, and develop potential new therapies. BioXcel Therapeutics has a pipeline of product candidates in various stages of development, including BXCL501 for agitation in dementia, BXCL701 for cocaine use disorder, and BXCL801 for acute suicidal ideation and behavior in patients with major depressive disorder.

Cercle is an AI platform that advances healthcare for women by transforming healthcare data into real-time, high-quality insights. The platform caters to women's healthcare providers, payors, and pharma companies, helping them run more efficient businesses and provide personalized care. Cercle's Biomedical Graph unlocks insights at unprecedented speed and accuracy, optimizing patient care and improving outcomes in areas such as assisted reproduction and fertility processes.

SOMA is a Research Automation Platform that accelerates medical innovation by providing up to 100x speedup through process automation. The platform analyzes medical research articles, extracts important concepts, and identifies causal and associative relationships between them. It organizes this information into a specialized database forming a knowledge graph. Researchers can retrieve causal chains, access specific research articles, and perform tasks like concept analysis, drug repurposing, and target discovery. SOMA enhances literature review efficiency by finding relevant articles based on causal chains and keywords specified by the user. It empowers researchers to focus on their research by saving up to 95% of the time spent on pre-processing documents. The platform offers freemium access with extended functionality for 14 days and advanced features available through subscription.

Ignota Labs is a technology company focused on rescuing failing drugs and bringing new life to abandoned projects, ultimately providing hope to patients. The company utilizes a proprietary AI model, SAFEPATH, which applies deep learning to bioinformatics and cheminformatics datasets to solve drug safety issues. Ignota Labs aims to identify promising drug targets, address safety problems in clinical trials, and accelerate the delivery of therapeutically effective drugs to patients.

2025-AI-College-Jobs is a repository containing a comprehensive list of AI/ML & Data Science jobs suitable for college students seeking internships or new graduate positions. The repository is regularly updated with positions posted within the last 120 days, featuring opportunities from various companies in the USA and internationally. The list includes positions in areas such as research scientist internships, quantitative research analyst roles, and other data science-related positions. The repository aims to provide a valuable resource for students looking to kickstart their careers in the field of artificial intelligence and machine learning.

Cyclops is a toolkit for facilitating research and deployment of ML models for healthcare. It provides a few high-level APIs namely: data - Create datasets for training, inference and evaluation. We use the popular 🤗 datasets to efficiently load and slice different modalities of data models - Use common model implementations using scikit-learn and PyTorch tasks - Use common ML task formulations such as binary classification or multi-label classification on tabular, time-series and image data evaluate - Evaluate models on clinical prediction tasks monitor - Detect dataset shift relevant for clinical use cases report - Create model report cards for clinical ML models

Kaapana is an open-source toolkit for state-of-the-art platform provisioning in the field of medical data analysis. The applications comprise AI-based workflows and federated learning scenarios with a focus on radiological and radiotherapeutic imaging. Obtaining large amounts of medical data necessary for developing and training modern machine learning methods is an extremely challenging effort that often fails in a multi-center setting, e.g. due to technical, organizational and legal hurdles. A federated approach where the data remains under the authority of the individual institutions and is only processed on-site is, in contrast, a promising approach ideally suited to overcome these difficulties. Following this federated concept, the goal of Kaapana is to provide a framework and a set of tools for sharing data processing algorithms, for standardized workflow design and execution as well as for performing distributed method development. This will facilitate data analysis in a compliant way enabling researchers and clinicians to perform large-scale multi-center studies. By adhering to established standards and by adopting widely used open technologies for private cloud development and containerized data processing, Kaapana integrates seamlessly with the existing clinical IT infrastructure, such as the Picture Archiving and Communication System (PACS), and ensures modularity and easy extensibility.

Open Life Science AI: Medical Reasoning Tasks is a collaborative hub for developing cutting-edge reasoning tasks for Large Language Models (LLMs) in the medical, healthcare, and clinical domains. The repository aims to advance AI capabilities in healthcare by fostering accurate diagnoses, personalized treatments, and improved patient outcomes. It offers a diverse range of medical reasoning challenges such as Diagnostic Reasoning, Treatment Planning, Medical Image Analysis, Clinical Data Interpretation, Patient History Analysis, Ethical Decision Making, Medical Literature Comprehension, and Drug Interaction Assessment. Contributors can join the community of healthcare professionals, AI researchers, and enthusiasts to contribute to the repository by creating new tasks or improvements following the provided guidelines. The repository also provides resources including a task list, evaluation metrics, medical AI papers, and healthcare datasets for training and evaluation.

AI Hospital is a research repository focusing on the interactive evaluation and collaboration of Large Language Models (LLMs) as intern doctors for clinical diagnosis. The repository includes a simulation module tailored for various medical roles, introduces the Multi-View Medical Evaluation (MVME) Benchmark, provides dialog history documents of LLMs, replication instructions, performance evaluation, and guidance for creating intern doctor agents. The collaborative diagnosis with LLMs emphasizes dispute resolution. The study was authored by Zhihao Fan, Jialong Tang, Wei Chen, Siyuan Wang, Zhongyu Wei, Jun Xie, Fei Huang, and Jingren Zhou.

FuseMedML is a Python framework designed to accelerate machine learning-based discovery in the medical field by promoting code reuse. It provides a flexible design concept where data is stored in a nested dictionary, allowing easy handling of multi-modality information. The framework includes components for creating custom models, loss functions, metrics, and data processing operators. Additionally, FuseMedML offers 'batteries included' key components such as fuse.data for data processing, fuse.eval for model evaluation, and fuse.dl for reusable deep learning components. It supports PyTorch and PyTorch Lightning libraries and encourages the creation of domain extensions for specific medical domains.

The repository 'LLM-for-Healthcare' provides a comprehensive survey of large language models (LLMs) for healthcare, covering data, technology, applications, and accountability and ethics. It includes information on various LLM models, training data, evaluation methods, and computation costs. The repository also discusses tasks such as NER, text classification, question answering, dialogue systems, and generation of medical reports from images in the healthcare domain.

HuatuoGPT2 is an innovative domain-adapted medical large language model that excels in medical knowledge and dialogue proficiency. It showcases state-of-the-art performance in various medical benchmarks, surpassing GPT-4 in expert evaluations and fresh medical licensing exams. The open-source release includes HuatuoGPT2 models in 7B, 13B, and 34B versions, training code for one-stage adaptation, partial pre-training and fine-tuning instructions, and evaluation methods for medical response capabilities and professional pharmacist exams. The tool aims to enhance LLM capabilities in the Chinese medical field through open-source principles.

KG-LLM-Papers is a repository that collects papers integrating knowledge graphs (KGs) and large language models (LLMs). It serves as a comprehensive resource for research on the role of KGs in the era of LLMs, covering surveys, methods, and resources related to this integration.

Grand Challenge is a platform that provides access to large amounts of annotated training data, objective comparisons of state-of-the-art machine learning solutions, and clinical validation using real-world data. It assists researchers, data scientists, and clinicians in collaborating to develop robust machine learning solutions to problems in biomedical imaging.

LangTest is a comprehensive evaluation library for custom LLM and NLP models. It aims to deliver safe and effective language models by providing tools to test model quality, augment training data, and support popular NLP frameworks. LangTest comes with benchmark datasets to challenge and enhance language models, ensuring peak performance in various linguistic tasks. The tool offers more than 60 distinct types of tests with just one line of code, covering aspects like robustness, bias, representation, fairness, and accuracy. It supports testing LLMS for question answering, toxicity, clinical tests, legal support, factuality, sycophancy, and summarization.

This repository is a curated collection of resources for fine-tuning Large Language Models (LLMs) like GPT, BERT, RoBERTa, and their variants. It includes tutorials, papers, tools, frameworks, and best practices to aid researchers, data scientists, and machine learning practitioners in adapting pre-trained models to specific tasks and domains. The resources cover a wide range of topics related to fine-tuning LLMs, providing valuable insights and guidelines to streamline the process and enhance model performance.

LLMs4TS is a repository focused on the application of cutting-edge AI technologies for time-series analysis. It covers advanced topics such as self-supervised learning, Graph Neural Networks for Time Series, Large Language Models for Time Series, Diffusion models, Mixture-of-Experts architectures, and Mamba models. The resources in this repository span various domains like healthcare, finance, and traffic, offering tutorials, courses, and workshops from prestigious conferences. Whether you're a professional, data scientist, or researcher, the tools and techniques in this repository can enhance your time-series data analysis capabilities.

AI-IGU is a GitHub repository focused on Artificial Intelligence (AI) concepts, technology, software development, and algorithm improvement for all ages and professions. It emphasizes the importance of future software for future scientists and the increasing need for software developers in the industry. The repository covers various topics related to AI, including machine learning, deep learning, data mining, data science, big data, and more. It provides educational materials, practical examples, and hands-on projects to enhance software development skills and create awareness in the field of AI.

This repository serves as a comprehensive survey on the application of Large Language Models (LLMs) on tabular data, focusing on tasks such as prediction, data generation, and table understanding. It aims to consolidate recent progress in this field by summarizing key techniques, metrics, datasets, models, and optimization approaches. The survey identifies strengths, limitations, unexplored territories, and gaps in the existing literature, providing insights for future research directions. It also offers code and dataset references to empower readers with the necessary tools and knowledge to address challenges in this rapidly evolving domain.

The LLM course is divided into three parts: 1. 🧩 **LLM Fundamentals** covers essential knowledge about mathematics, Python, and neural networks. 2. 🧑‍🔬 **The LLM Scientist** focuses on building the best possible LLMs using the latest techniques. 3. 👷 **The LLM Engineer** focuses on creating LLM-based applications and deploying them. For an interactive version of this course, I created two **LLM assistants** that will answer questions and test your knowledge in a personalized way: * 🤗 **HuggingChat Assistant**: Free version using Mixtral-8x7B. * 🤖 **ChatGPT Assistant**: Requires a premium account. ## 📝 Notebooks A list of notebooks and articles related to large language models. ### Tools | Notebook | Description | Notebook | |----------|-------------|----------| | 🧐 LLM AutoEval | Automatically evaluate your LLMs using RunPod |  | | 🥱 LazyMergekit | Easily merge models using MergeKit in one click. |  | | 🦎 LazyAxolotl | Fine-tune models in the cloud using Axolotl in one click. |  | | ⚡ AutoQuant | Quantize LLMs in GGUF, GPTQ, EXL2, AWQ, and HQQ formats in one click. |  | | 🌳 Model Family Tree | Visualize the family tree of merged models. |  | | 🚀 ZeroSpace | Automatically create a Gradio chat interface using a free ZeroGPU. |  |

The 'machine-learning-research' repository is a comprehensive collection of resources related to mathematics, machine learning, deep learning, artificial intelligence, data science, and various scientific fields. It includes materials such as courses, tutorials, books, podcasts, communities, online courses, papers, and dissertations. The repository covers topics ranging from fundamental math skills to advanced machine learning concepts, with a focus on applications in healthcare, genetics, computational biology, precision health, and AI in science. It serves as a valuable resource for individuals interested in learning and researching in the fields of machine learning and related disciplines.

MONAI is a PyTorch-based, open-source framework for deep learning in healthcare imaging. It provides a comprehensive set of tools for medical image analysis, including data preprocessing, model training, and evaluation. MONAI is designed to be flexible and easy to use, making it a valuable resource for researchers and developers in the field of medical imaging.

Seismometer is a suite of tools designed to evaluate AI model performance in healthcare settings. It helps healthcare organizations assess the accuracy of AI models and ensure equitable care for diverse patient populations. The tool allows users to validate model performance using standardized evaluation criteria based on local data and workflows. It includes templates for analyzing statistical performance, fairness across different cohorts, and the impact of interventions on outcomes. Seismometer is continuously evolving to incorporate new validation and analysis techniques.

Expert in oncology trial matching, leveraging advanced GPT-4 Turbo techniques.

Medical engineer specializing in HL7/FHIR data conversion.

医学统计领域的专家，提供详细分析性回应。

Enhanced with biomedical document knowledge for in-depth blood test analysis.

Answer anything about SELECT trial

I assist with statistical analysis for molecular biology

Expert in SCLC research, focused on a specific paper and broader SCLC knowledge.

Especialista em dados de pós-graduação em Fisiologia

Scientific expert in evaluating articles using ROBINS-I and Cochrane tools

Expert in all aspects of spectral flow cytometry.

我是专门为神经科学领域设计的，可以帮助你在这一领域内进行高水平的研究和写作

Expert in healthcare data analysis, coding, and clinical trials.

Le GPT custom de Sclépios IA décrypte les termes médicaux pour les soignants, facilitant la compréhension des cas cliniques. Découvrez plus sur sclepios-mobile.com.

GPT for AI in Medicine

Clinical trial assistant answering questions about clinical trials.

Comprehensive Guide in Clinical Trials & Regulations

Find active recruiting oncology clinical trials near you.

Accurate and timely matching of patients with clinical trials

Direct, insightful EEG and neurofeedback analysis specialist.