Docs2KG
Docs2KG: A Human-LLM Collaborative Approach to Unified Knowledge Graph Construction from Heterogeneous Documents
Stars: 221
Docs2KG is a tool designed for constructing a unified knowledge graph from heterogeneous documents. It addresses the challenges of digitizing diverse unstructured documents and constructing a high-quality knowledge graph with less effort. The tool combines bottom-up and top-down approaches, utilizing a human-LLM collaborative interface to enhance the generated knowledge graph. It organizes the knowledge graph into MetaKG, LayoutKG, and SemanticKG, providing a comprehensive view of document content. Docs2KG aims to streamline the process of knowledge graph construction and offers metrics for evaluating the quality of automatic construction.
README:
A Human-LLM Collaborative Approach to Unified Knowledge Graph Construction from Heterogeneous Documents
We have published the package to PyPi: Docs2KG,
You can install it via:
pip install Docs2KG
python -m spacy download en_core_web_sm
Detailed setup and tutorial can be found in the documentation.
To digest diverse unstructured documents into a unified knowledge graph, there are two main challenges:
-
How to get the documents to be digitized?
- With the dual-path data processing
- For image based documents, like scanned PDF, images, etc., we can process them through the layout analysis and OCR, etc. Docling and MinerU are focusing on this part.
- For native digital documents, like ebook, docx, html, etc., we can process them through the programming parser
- It is promising that we will have a robust solution soon.
- With the dual-path data processing
- How to construct a high-quality unified knowledge graph with less effort?
For now, a lot of tools are focusing on the first challenge, however, overlook the second challenge.
To construct a high-quality unified knowledge graph with less effort, we propose the Docs2KG.
- We adapt both bottom-up and top-down approaches to construct the unified knowledge graph and its ontology with the help of LLM.
- We organise the knowledge graph from three aspects:
- MetaKG: the knowledge about all documents, like the author, the publication date, etc.
- LayoutKG: the knowledge about the layout of the documents, like title, subtitle, section, etc.
- SemanticKG: the knowledge about the content of the documents, like entities, relations, etc.
- We provide a human-LLM collaborative interface which allows human to review and enhance the generated knowledge graph.
- An updated version of ontology, entity list, relation list will in return help the KG Construction LLM agent to generate better results in the next iteration.
- The output of the knowledge graph can be used in downstream applications, like RAG, etc.
- Link for the human-LLM collaborative interface: Docs2KG
- After the annotation, metrics to evaluate the quality of automatic construction will be provided.
- How many entities are correctly extracted by each method?
- How many relations are correctly extracted by each method?
- Contribution and retention of each method in the final knowledge graph, including human annotation.
Example of the interface, you only need to register, and you can access it freely.
python3 -m venv venv
source venv/bin/activate
pip install -r requirements.txt
pip install -r requirements.dev.txt
pip install -e .
If you find this package useful, please consider citing our work:
@misc{sun2024docs2kg,
title = {Docs2KG: Unified Knowledge Graph Construction from Heterogeneous Documents Assisted by Large Language Models},
author = {Qiang Sun and Yuanyi Luo and Wenxiao Zhang and Sirui Li and Jichunyang Li and Kai Niu and Xiangrui Kong and Wei Liu},
year = {2024},
eprint = {2406.02962},
archivePrefix = {arXiv},
primaryClass = {cs.CL}
}
For Tasks:
Click tags to check more tools for each tasksFor Jobs:
Alternative AI tools for Docs2KG
Similar Open Source Tools
Docs2KG
Docs2KG is a tool designed for constructing a unified knowledge graph from heterogeneous documents. It addresses the challenges of digitizing diverse unstructured documents and constructing a high-quality knowledge graph with less effort. The tool combines bottom-up and top-down approaches, utilizing a human-LLM collaborative interface to enhance the generated knowledge graph. It organizes the knowledge graph into MetaKG, LayoutKG, and SemanticKG, providing a comprehensive view of document content. Docs2KG aims to streamline the process of knowledge graph construction and offers metrics for evaluating the quality of automatic construction.
LabelLLM
LabelLLM is an open-source data annotation platform designed to optimize the data annotation process for LLM development. It offers flexible configuration, multimodal data support, comprehensive task management, and AI-assisted annotation. Users can access a suite of annotation tools, enjoy a user-friendly experience, and enhance efficiency. The platform allows real-time monitoring of annotation progress and quality control, ensuring data integrity and timeliness.
ollama-grid-search
A Rust based tool to evaluate LLM models, prompts and model params. It automates the process of selecting the best model parameters, given an LLM model and a prompt, iterating over the possible combinations and letting the user visually inspect the results. The tool assumes the user has Ollama installed and serving endpoints, either in `localhost` or in a remote server. Key features include: * Automatically fetches models from local or remote Ollama servers * Iterates over different models and params to generate inferences * A/B test prompts on different models simultaneously * Allows multiple iterations for each combination of parameters * Makes synchronous inference calls to avoid spamming servers * Optionally outputs inference parameters and response metadata (inference time, tokens and tokens/s) * Refetching of individual inference calls * Model selection can be filtered by name * List experiments which can be downloaded in JSON format * Configurable inference timeout * Custom default parameters and system prompts can be defined in settings
Woodpecker
Woodpecker is a tool designed to correct hallucinations in Multimodal Large Language Models (MLLMs) by introducing a training-free method that picks out and corrects inconsistencies between generated text and image content. It consists of five stages: key concept extraction, question formulation, visual knowledge validation, visual claim generation, and hallucination correction. Woodpecker can be easily integrated with different MLLMs and provides interpretable results by accessing intermediate outputs of the stages. The tool has shown significant improvements in accuracy over baseline models like MiniGPT-4 and mPLUG-Owl.
RAG-FiT
RAG-FiT is a library designed to improve Language Models' ability to use external information by fine-tuning models on specially created RAG-augmented datasets. The library assists in creating training data, training models using parameter-efficient finetuning (PEFT), and evaluating performance using RAG-specific metrics. It is modular, customizable via configuration files, and facilitates fast prototyping and experimentation with various RAG settings and configurations.
chem-bench
ChemBench is a project aimed at expanding chemistry benchmark tasks in a BIG-bench compatible way, providing a pipeline to benchmark frontier and open models. It allows users to run benchmarking tasks on models with existing presets, offering predefined parameters and processing steps. The library facilitates benchmarking models on the entire suite, addressing challenges such as prompt structure, parsing, and scoring methods. Users can contribute to the project by following the developer notes.
RAGFoundry
RAG Foundry is a library designed to enhance Large Language Models (LLMs) by fine-tuning models on RAG-augmented datasets. It helps create training data, train models using parameter-efficient finetuning (PEFT), and measure performance using RAG-specific metrics. The library is modular, customizable using configuration files, and facilitates prototyping with various RAG settings and configurations for tasks like data processing, retrieval, training, inference, and evaluation.
baal
Baal is an active learning library that supports both industrial applications and research use cases. It provides a framework for Bayesian active learning methods such as Monte-Carlo Dropout, MCDropConnect, Deep ensembles, and Semi-supervised learning. Baal helps in labeling the most uncertain items in the dataset pool to improve model performance and reduce annotation effort. The library is actively maintained by a dedicated team and has been used in various research papers for production and experimentation.
bocoel
BoCoEL is a tool that leverages Bayesian Optimization to efficiently evaluate large language models by selecting a subset of the corpus for evaluation. It encodes individual entries into embeddings, uses Bayesian optimization to select queries, retrieves from the corpus, and provides easily managed evaluations. The tool aims to reduce computation costs during evaluation with a dynamic budget, supporting models like GPT2, Pythia, and LLAMA through integration with Hugging Face transformers and datasets. BoCoEL offers a modular design and efficient representation of the corpus to enhance evaluation quality.
llmblueprint
LLM Blueprint is an official implementation of a paper that enables text-to-image generation with complex and detailed prompts. It leverages Large Language Models (LLMs) to extract critical components from text prompts, including bounding box coordinates for foreground objects, detailed textual descriptions for individual objects, and a succinct background context. The tool operates in two phases: Global Scene Generation creates an initial scene using object layouts and background context, and an Iterative Refinement Scheme refines box-level content to align with textual descriptions, ensuring consistency and improving recall compared to baseline diffusion models.
gpt-researcher
GPT Researcher is an autonomous agent designed for comprehensive online research on a variety of tasks. It can produce detailed, factual, and unbiased research reports with customization options. The tool addresses issues of speed, determinism, and reliability by leveraging parallelized agent work. The main idea involves running 'planner' and 'execution' agents to generate research questions, seek related information, and create research reports. GPT Researcher optimizes costs and completes tasks in around 3 minutes. Features include generating long research reports, aggregating web sources, an easy-to-use web interface, scraping web sources, and exporting reports to various formats.
MME-RealWorld
MME-RealWorld is a benchmark designed to address real-world applications with practical relevance, featuring 13,366 high-resolution images and 29,429 annotations across 43 tasks. It aims to provide substantial recognition challenges and overcome common barriers in existing Multimodal Large Language Model benchmarks, such as small data scale, restricted data quality, and insufficient task difficulty. The dataset offers advantages in data scale, data quality, task difficulty, and real-world utility compared to existing benchmarks. It also includes a Chinese version with additional images and QA pairs focused on Chinese scenarios.
KAG
KAG is a logical reasoning and Q&A framework based on the OpenSPG engine and large language models. It is used to build logical reasoning and Q&A solutions for vertical domain knowledge bases. KAG supports logical reasoning, multi-hop fact Q&A, and integrates knowledge and chunk mutual indexing structure, conceptual semantic reasoning, schema-constrained knowledge construction, and logical form-guided hybrid reasoning and retrieval. The framework includes kg-builder for knowledge representation and kg-solver for logical symbol-guided hybrid solving and reasoning engine. KAG aims to enhance LLM service framework in professional domains by integrating logical and factual characteristics of KGs.
nixtla
Nixtla is a production-ready generative pretrained transformer for time series forecasting and anomaly detection. It can accurately predict various domains such as retail, electricity, finance, and IoT with just a few lines of code. TimeGPT introduces a paradigm shift with its standout performance, efficiency, and simplicity, making it accessible even to users with minimal coding experience. The model is based on self-attention and is independently trained on a vast time series dataset to minimize forecasting error. It offers features like zero-shot inference, fine-tuning, API access, adding exogenous variables, multiple series forecasting, custom loss function, cross-validation, prediction intervals, and handling irregular timestamps.
llama_deploy
llama_deploy is an async-first framework for deploying, scaling, and productionizing agentic multi-service systems based on workflows from llama_index. It allows building workflows in llama_index and deploying them seamlessly with minimal changes to code. The system includes services endlessly processing tasks, a control plane managing state and services, an orchestrator deciding task handling, and fault tolerance mechanisms. It is designed for high-concurrency scenarios, enabling real-time and high-throughput applications.
For similar tasks
Docs2KG
Docs2KG is a tool designed for constructing a unified knowledge graph from heterogeneous documents. It addresses the challenges of digitizing diverse unstructured documents and constructing a high-quality knowledge graph with less effort. The tool combines bottom-up and top-down approaches, utilizing a human-LLM collaborative interface to enhance the generated knowledge graph. It organizes the knowledge graph into MetaKG, LayoutKG, and SemanticKG, providing a comprehensive view of document content. Docs2KG aims to streamline the process of knowledge graph construction and offers metrics for evaluating the quality of automatic construction.
marvin
Marvin is a lightweight AI toolkit for building natural language interfaces that are reliable, scalable, and easy to trust. Each of Marvin's tools is simple and self-documenting, using AI to solve common but complex challenges like entity extraction, classification, and generating synthetic data. Each tool is independent and incrementally adoptable, so you can use them on their own or in combination with any other library. Marvin is also multi-modal, supporting both image and audio generation as well using images as inputs for extraction and classification. Marvin is for developers who care more about _using_ AI than _building_ AI, and we are focused on creating an exceptional developer experience. Marvin users should feel empowered to bring tightly-scoped "AI magic" into any traditional software project with just a few extra lines of code. Marvin aims to merge the best practices for building dependable, observable software with the best practices for building with generative AI into a single, easy-to-use library. It's a serious tool, but we hope you have fun with it. Marvin is open-source, free to use, and made with 💙 by the team at Prefect.
deep-seek
DeepSeek is a new experimental architecture for a large language model (LLM) powered internet-scale retrieval engine. Unlike current research agents designed as answer engines, DeepSeek aims to process a vast amount of sources to collect a comprehensive list of entities and enrich them with additional relevant data. The end result is a table with retrieved entities and enriched columns, providing a comprehensive overview of the topic. DeepSeek utilizes both standard keyword search and neural search to find relevant content, and employs an LLM to extract specific entities and their associated contents. It also includes a smaller answer agent to enrich the retrieved data, ensuring thoroughness. DeepSeek has the potential to revolutionize research and information gathering by providing a comprehensive and structured way to access information from the vastness of the internet.
spacy-llm
This package integrates Large Language Models (LLMs) into spaCy, featuring a modular system for **fast prototyping** and **prompting** , and turning unstructured responses into **robust outputs** for various NLP tasks, **no training data** required. It supports open-source LLMs hosted on Hugging Face 🤗: Falcon, Dolly, Llama 2, OpenLLaMA, StableLM, Mistral. Integration with LangChain 🦜️🔗 - all `langchain` models and features can be used in `spacy-llm`. Tasks available out of the box: Named Entity Recognition, Text classification, Lemmatization, Relationship extraction, Sentiment analysis, Span categorization, Summarization, Entity linking, Translation, Raw prompt execution for maximum flexibility. Soon: Semantic role labeling. Easy implementation of **your own functions** via spaCy's registry for custom prompting, parsing and model integrations. For an example, see here. Map-reduce approach for splitting prompts too long for LLM's context window and fusing the results back together
pebblo
Pebblo enables developers to safely load data and promote their Gen AI app to deployment without worrying about the organization’s compliance and security requirements. The project identifies semantic topics and entities found in the loaded data and summarizes them on the UI or a PDF report.
spaCy
spaCy is an industrial-strength Natural Language Processing (NLP) library in Python and Cython. It incorporates the latest research and is designed for real-world applications. The library offers pretrained pipelines supporting 70+ languages, with advanced neural network models for tasks such as tagging, parsing, named entity recognition, and text classification. It also facilitates multi-task learning with pretrained transformers like BERT, along with a production-ready training system and streamlined model packaging, deployment, and workflow management. spaCy is commercial open-source software released under the MIT license.
lima
LIMA is a multilingual linguistic analyzer developed by the CEA LIST, LASTI laboratory. It is Free Software available under the MIT license. LIMA has state-of-the-art performance for more than 60 languages using deep learning modules. It also includes a powerful rules-based mechanism called ModEx for extracting information in new domains without annotated data.
zshot
Zshot is a highly customizable framework for performing Zero and Few shot named entity and relationships recognition. It can be used for mentions extraction, wikification, zero and few shot named entity recognition, zero and few shot named relationship recognition, and visualization of zero-shot NER and RE extraction. The framework consists of two main components: the mentions extractor and the linker. There are multiple mentions extractors and linkers available, each serving a specific purpose. Zshot also includes a relations extractor and a knowledge extractor for extracting relations among entities and performing entity classification. The tool requires Python 3.6+ and dependencies like spacy, torch, transformers, evaluate, and datasets for evaluation over datasets like OntoNotes. Optional dependencies include flair and blink for additional functionalities. Zshot provides examples, tutorials, and evaluation methods to assess the performance of the components.
For similar jobs
sweep
Sweep is an AI junior developer that turns bugs and feature requests into code changes. It automatically handles developer experience improvements like adding type hints and improving test coverage.
teams-ai
The Teams AI Library is a software development kit (SDK) that helps developers create bots that can interact with Teams and Microsoft 365 applications. It is built on top of the Bot Framework SDK and simplifies the process of developing bots that interact with Teams' artificial intelligence capabilities. The SDK is available for JavaScript/TypeScript, .NET, and Python.
ai-guide
This guide is dedicated to Large Language Models (LLMs) that you can run on your home computer. It assumes your PC is a lower-end, non-gaming setup.
classifai
Supercharge WordPress Content Workflows and Engagement with Artificial Intelligence. Tap into leading cloud-based services like OpenAI, Microsoft Azure AI, Google Gemini and IBM Watson to augment your WordPress-powered websites. Publish content faster while improving SEO performance and increasing audience engagement. ClassifAI integrates Artificial Intelligence and Machine Learning technologies to lighten your workload and eliminate tedious tasks, giving you more time to create original content that matters.
chatbot-ui
Chatbot UI is an open-source AI chat app that allows users to create and deploy their own AI chatbots. It is easy to use and can be customized to fit any need. Chatbot UI is perfect for businesses, developers, and anyone who wants to create a chatbot.
BricksLLM
BricksLLM is a cloud native AI gateway written in Go. Currently, it provides native support for OpenAI, Anthropic, Azure OpenAI and vLLM. BricksLLM aims to provide enterprise level infrastructure that can power any LLM production use cases. Here are some use cases for BricksLLM: * Set LLM usage limits for users on different pricing tiers * Track LLM usage on a per user and per organization basis * Block or redact requests containing PIIs * Improve LLM reliability with failovers, retries and caching * Distribute API keys with rate limits and cost limits for internal development/production use cases * Distribute API keys with rate limits and cost limits for students
uAgents
uAgents is a Python library developed by Fetch.ai that allows for the creation of autonomous AI agents. These agents can perform various tasks on a schedule or take action on various events. uAgents are easy to create and manage, and they are connected to a fast-growing network of other uAgents. They are also secure, with cryptographically secured messages and wallets.
griptape
Griptape is a modular Python framework for building AI-powered applications that securely connect to your enterprise data and APIs. It offers developers the ability to maintain control and flexibility at every step. Griptape's core components include Structures (Agents, Pipelines, and Workflows), Tasks, Tools, Memory (Conversation Memory, Task Memory, and Meta Memory), Drivers (Prompt and Embedding Drivers, Vector Store Drivers, Image Generation Drivers, Image Query Drivers, SQL Drivers, Web Scraper Drivers, and Conversation Memory Drivers), Engines (Query Engines, Extraction Engines, Summary Engines, Image Generation Engines, and Image Query Engines), and additional components (Rulesets, Loaders, Artifacts, Chunkers, and Tokenizers). Griptape enables developers to create AI-powered applications with ease and efficiency.