Best AI tools for< Analyze Cell Populations >
20 - AI tool Sites
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Deepcell
Deepcell is a company that develops technology for single-cell analysis. Their REM-I platform combines label-free imaging, deep learning, and gentle sorting to leverage single cell morphology as a high-dimensional quantitative readout. This allows researchers to gain insights into cells' phenotype and function to address important research questions across biology.
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Scientific Frontier
The website focuses on groundbreaking research in various scientific fields, including quantum communication, semiconductor dynamics, mental health support, dietary interventions, computer vision, autonomous systems safety, movie recommendations, fake cell tower detection, electron-boson interactions, solar observations, network efficiency, galaxy formation, asteroseismology, protein biosynthesis, and high-temperature semiconductor diodes.
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Byterat
Byterat is a cloud-based platform that provides battery data management, visualization, and analytics. It offers an end-to-end data pipeline that automatically synchronizes, processes, and visualizes materials, manufacturing, and test data from all labs. Byterat also provides 24/7 access to experiments from anywhere in the world and integrates seamlessly with current workflows. It is customizable to specific cell chemistries and allows users to build custom visualizations, dashboards, and analyses. Byterat's AI-powered battery research has been published in leading journals, and its team has pioneered a new class of models that extract tell-tale signals of battery health from electrical signals to forecast future performance.
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Elicit
Elicit is a research tool that uses artificial intelligence to help researchers analyze research papers more efficiently. It can summarize papers, extract data, and synthesize findings, saving researchers time and effort. Elicit is used by over 800,000 researchers worldwide and has been featured in publications such as Nature and Science. It is a powerful tool that can help researchers stay up-to-date on the latest research and make new discoveries.
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Plerdy
Plerdy is a comprehensive suite of conversion rate optimization tools that helps businesses track, analyze, and convert their website visitors into buyers. With a range of features including website heatmaps, session replay software, pop-up software, website feedback tools, and more, Plerdy provides businesses with the insights they need to improve their website's usability and conversion rates.
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TimeComplexity.ai
TimeComplexity.ai is an AI tool that allows users to analyze the runtime complexity of their code. It works across different programming languages without the need for headers, imports, or a main statement. Users can input their code and get insights into its performance. However, it is important to note that the results may not always be accurate, so users should use the tool at their own risk.
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CLIP Interrogator
CLIP Interrogator is a tool that uses the CLIP (Contrastive Language–Image Pre-training) model to analyze images and generate descriptive text or tags. It effectively bridges the gap between visual content and language by interpreting the contents of images through natural language descriptions. The tool is particularly useful for understanding or replicating the style and content of existing images, as it helps in identifying key elements and suggesting prompts for creating similar imagery.
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Surveyed.live
Surveyed.live is an AI-powered video survey platform that allows businesses to collect feedback and insights from customers through customizable survey templates. The platform offers features such as video surveys, AI touch response, comprehensible dashboard, Chrome extension, actionable insights, integration, predefined library, appealing survey creation, customer experience statistics, and more. Surveyed.live helps businesses enhance customer satisfaction, improve decision-making, and drive business growth by leveraging AI technology for video reviews and surveys. The platform caters to various industries including hospitality, healthcare, education, customer service, delivery services, and more, providing a versatile solution for optimizing customer relationships and improving overall business performance.
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DINGR
DINGR is an AI-powered solution designed to help gamers analyze their performance in League of Legends. The tool offers detailed insights and metrics to help users track their progress, compare their gameplay with friends, and improve their gaming skills. DINGR is currently in development with limited beta spots available for early access.
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Comment Explorer
Comment Explorer is a free tool that allows users to analyze comments on YouTube videos. Users can gain insights into audience engagement, sentiment, and top subjects of discussion. The tool helps content creators understand the impact of their videos and improve interaction with viewers.
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AI Tech Debt Analysis Tool
This website is an AI tool that helps senior developers analyze AI tech debt. AI tech debt is the technical debt that accumulates when AI systems are developed and deployed. It can be difficult to identify and quantify AI tech debt, but it can have a significant impact on the performance and reliability of AI systems. This tool uses a variety of techniques to analyze AI tech debt, including static analysis, dynamic analysis, and machine learning. It can help senior developers to identify and quantify AI tech debt, and to develop strategies to reduce it.
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Architecture Helper
Architecture Helper is an AI-based application that allows users to analyze real-world buildings, explore architectural influences, and generate new structures with customizable styles. Users can submit images for instant design analysis, mix and match different architectural styles, and create stunning architectural and interior images. The application provides unlimited access for $5 per month, with the flexibility to cancel anytime. Named as a 'Top AI Tool' in Real Estate by CRE Software, Architecture Helper offers a powerful and playful tool for architecture enthusiasts to explore, learn, and create.
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ChatInDoc
ChatInDoc is an AI-powered tool designed to revolutionize the way people interact with and comprehend lengthy documents. By leveraging cutting-edge AI technology, ChatInDoc offers users the ability to efficiently analyze, summarize, and extract key information from various file formats such as PDFs, Office documents, and text files. With features like IR analysis, term lookup, PDF viewing, and AI-powered chat capabilities, ChatInDoc aims to streamline the process of digesting complex information and enhance productivity. The application's user-friendly interface and advanced AI algorithms make it a valuable tool for students, professionals, and anyone dealing with extensive document reading tasks.
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LatenceTech
LatenceTech is a tech startup that specializes in network latency monitoring and analysis. The platform offers real-time monitoring, prediction, and in-depth analysis of network latency using AI software. It provides cloud-based network analytics, versatile network applications, and data science-driven network acceleration. LatenceTech focuses on customer satisfaction by providing full customer experience service and expert support. The platform helps businesses optimize network performance, minimize latency issues, and achieve faster network speed and better connectivity.
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ZeroGPT
ZeroGPT is a trusted AI detector tool that specializes in detecting AI-generated content like ChatGPT, GPT4, and Gemini. It offers advanced features such as AI summarization, paraphrasing, grammar and spell checking, translation, word counting, and citation generation. The tool is designed to provide highly accurate results and supports multiple languages. ZeroGPT stands out for its highlighted sentences feature, batch file upload capability, high accuracy model, and automatically generated reports. It utilizes DeepAnalyse™ Technology, a multi-stage methodology that optimizes accuracy while minimizing false positives and negatives. Users can unlock premium features and API access to enhance their writing skills and integrate the tool on a large scale.
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StrawPoll.ai
StrawPoll.ai is an AI-powered platform that offers tools for creating polls, generating charts, and utilizing machine learning to analyze data. Users can easily create polls tailored to their needs, share them to collect responses, and analyze the data using built-in chart and machine learning tools. The platform also provides a chart maker tool for visualizing existing data and a machine learning tool for building predictive models by identifying patterns in the data. Additionally, users can access guides for assistance and contact support for any queries.
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ExTalk
The website is an AI tool designed to help users import and talk to their ex-partners by importing their chats into the app. Users can continue texting or dating their ex even after a breakup. Additionally, the tool offers TikTok ad creative analytics for users to analyze and improve their TikTok advertising strategies.
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Monitr
Monitr is a data visualization and analytics platform that allows users to query, visualize, and share data in one place. It helps in tracking key metrics, making data-driven decisions, and breaking down data silos to provide a unified view of data from various sources. Users can create charts and dashboards, connect to different data sources like Postgresql and MySQL, and collaborate with teammates on SQL queries. Monitr's AI features are powered by Meta AI's Llama 3 LLM, enabling the development of powerful and flexible analytics tools for maximizing data utilization.
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Shortimize
Shortimize is an AI-powered platform designed to help users track, analyze, and explore short-form content across various social media platforms. It offers in-depth tracking of TikTok, Reels, and Shorts accounts by simply adding the URL. With features like AI-Search for viral videos, finding similar accounts and videos, and advanced data analysis, Shortimize aims to enhance short content marketing efforts. The platform provides granular data for every video and account, with 5,000 new viral videos added daily. Shortimize is trusted by leading companies and offers different plans with a 7-day free trial to cater to different user needs.
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AiAssistWorks
AiAssistWorks is an AI tool designed to enhance productivity in Google Sheets™ by leveraging various AI models such as GPT, Gemini, Claude, and more. It allows users to automate tasks, analyze data, and generate insights without the need for complex formulas. The tool offers a range of features to simplify spreadsheet tasks and is known for its affordability and ease of use. AiAssistWorks aims to save users time and effort by providing access to advanced AI capabilities directly within Google Sheets™.
20 - Open Source AI Tools
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ceLLama
ceLLama is a streamlined automation pipeline for cell type annotations using large-language models (LLMs). It operates locally to ensure privacy, provides comprehensive analysis by considering negative genes, offers efficient processing speed, and generates customized reports. Ideal for quick and preliminary cell type checks.
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Awesome-Segment-Anything
Awesome-Segment-Anything is a powerful tool for segmenting and extracting information from various types of data. It provides a user-friendly interface to easily define segmentation rules and apply them to text, images, and other data formats. The tool supports both supervised and unsupervised segmentation methods, allowing users to customize the segmentation process based on their specific needs. With its versatile functionality and intuitive design, Awesome-Segment-Anything is ideal for data analysts, researchers, content creators, and anyone looking to efficiently extract valuable insights from complex datasets.
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text2text
Text2Text is a comprehensive language modeling toolkit that offers a wide range of functionalities for text processing and generation. It provides tools for tokenization, embedding, TF-IDF calculations, BM25 scoring, indexing, translation, data augmentation, distance measurement, training/finetuning models, language identification, and serving models via a web server. The toolkit is designed to be user-friendly and efficient, offering a variety of features for natural language processing tasks.
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Awesome-Tabular-LLMs
This repository is a collection of papers on Tabular Large Language Models (LLMs) specialized for processing tabular data. It includes surveys, models, and applications related to table understanding tasks such as Table Question Answering, Table-to-Text, Text-to-SQL, and more. The repository categorizes the papers based on key ideas and provides insights into the advancements in using LLMs for processing diverse tables and fulfilling various tabular tasks based on natural language instructions.
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cellm
Cellm is an Excel extension that allows users to leverage Large Language Models (LLMs) like ChatGPT within cell formulas. It enables users to extract AI responses to text ranges, making it useful for automating repetitive tasks that involve data processing and analysis. Cellm supports various models from Anthropic, Mistral, OpenAI, and Google, as well as locally hosted models via Llamafiles, Ollama, or vLLM. The tool is designed to simplify the integration of AI capabilities into Excel for tasks such as text classification, data cleaning, content summarization, entity extraction, and more.
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LLMcalc
LLM Calculator is a script that estimates the memory requirements and performance of Hugging Face models based on quantization levels. It fetches model parameters, calculates required memory, and analyzes performance with different RAM/VRAM configurations. The tool supports Windows and Linux, AMD, Intel, and Nvidia GPUs. Users can input a Hugging Face model ID to get its parameter count and analyze memory requirements for various quantization schemes. The tool provides estimates for GPU offload percentage and throughput in tk/s. It requires dependencies like python, uv, pciutils for AMD + Linux, and drivers for Nvidia. The tool is designed for rough estimates and may not work with MultiGPU setups.
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Customer-Service-Conversational-Insights-with-Azure-OpenAI-Services
This solution accelerator is built on Azure Cognitive Search Service and Azure OpenAI Service to synthesize post-contact center transcripts for intelligent contact center scenarios. It converts raw transcripts into customer call summaries to extract insights around product and service performance. Key features include conversation summarization, key phrase extraction, speech-to-text transcription, sensitive information extraction, sentiment analysis, and opinion mining. The tool enables data professionals to quickly analyze call logs for improvement in contact center operations.
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deepdoctection
**deep** doctection is a Python library that orchestrates document extraction and document layout analysis tasks using deep learning models. It does not implement models but enables you to build pipelines using highly acknowledged libraries for object detection, OCR and selected NLP tasks and provides an integrated framework for fine-tuning, evaluating and running models. For more specific text processing tasks use one of the many other great NLP libraries. **deep** doctection focuses on applications and is made for those who want to solve real world problems related to document extraction from PDFs or scans in various image formats. **deep** doctection provides model wrappers of supported libraries for various tasks to be integrated into pipelines. Its core function does not depend on any specific deep learning library. Selected models for the following tasks are currently supported: * Document layout analysis including table recognition in Tensorflow with **Tensorpack**, or PyTorch with **Detectron2**, * OCR with support of **Tesseract**, **DocTr** (Tensorflow and PyTorch implementations available) and a wrapper to an API for a commercial solution, * Text mining for native PDFs with **pdfplumber**, * Language detection with **fastText**, * Deskewing and rotating images with **jdeskew**. * Document and token classification with all LayoutLM models provided by the **Transformer library**. (Yes, you can use any LayoutLM-model with any of the provided OCR-or pdfplumber tools straight away!). * Table detection and table structure recognition with **table-transformer**. * There is a small dataset for token classification available and a lot of new tutorials to show, how to train and evaluate this dataset using LayoutLMv1, LayoutLMv2, LayoutXLM and LayoutLMv3. * Comprehensive configuration of **analyzer** like choosing different models, output parsing, OCR selection. Check this notebook or the docs for more infos. * Document layout analysis and table recognition now runs with **Torchscript** (CPU) as well and **Detectron2** is not required anymore for basic inference. * [**new**] More angle predictors for determining the rotation of a document based on **Tesseract** and **DocTr** (not contained in the built-in Analyzer). * [**new**] Token classification with **LiLT** via **transformers**. We have added a model wrapper for token classification with LiLT and added a some LiLT models to the model catalog that seem to look promising, especially if you want to train a model on non-english data. The training script for LayoutLM can be used for LiLT as well and we will be providing a notebook on how to train a model on a custom dataset soon. **deep** doctection provides on top of that methods for pre-processing inputs to models like cropping or resizing and to post-process results, like validating duplicate outputs, relating words to detected layout segments or ordering words into contiguous text. You will get an output in JSON format that you can customize even further by yourself. Have a look at the **introduction notebook** in the notebook repo for an easy start. Check the **release notes** for recent updates. **deep** doctection or its support libraries provide pre-trained models that are in most of the cases available at the **Hugging Face Model Hub** or that will be automatically downloaded once requested. For instance, you can find pre-trained object detection models from the Tensorpack or Detectron2 framework for coarse layout analysis, table cell detection and table recognition. Training is a substantial part to get pipelines ready on some specific domain, let it be document layout analysis, document classification or NER. **deep** doctection provides training scripts for models that are based on trainers developed from the library that hosts the model code. Moreover, **deep** doctection hosts code to some well established datasets like **Publaynet** that makes it easy to experiment. It also contains mappings from widely used data formats like COCO and it has a dataset framework (akin to **datasets** so that setting up training on a custom dataset becomes very easy. **This notebook** shows you how to do this. **deep** doctection comes equipped with a framework that allows you to evaluate predictions of a single or multiple models in a pipeline against some ground truth. Check again **here** how it is done. Having set up a pipeline it takes you a few lines of code to instantiate the pipeline and after a for loop all pages will be processed through the pipeline.
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Open_Data_QnA
Open Data QnA is a Python library that allows users to interact with their PostgreSQL or BigQuery databases in a conversational manner, without needing to write SQL queries. The library leverages Large Language Models (LLMs) to bridge the gap between human language and database queries, enabling users to ask questions in natural language and receive informative responses. It offers features such as conversational querying with multiturn support, table grouping, multi schema/dataset support, SQL generation, query refinement, natural language responses, visualizations, and extensibility. The library is built on a modular design and supports various components like Database Connectors, Vector Stores, and Agents for SQL generation, validation, debugging, descriptions, embeddings, responses, and visualizations.
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Awesome-Attention-Heads
Awesome-Attention-Heads is a platform providing the latest research on Attention Heads, focusing on enhancing understanding of Transformer structure for model interpretability. It explores attention mechanisms for behavior, inference, and analysis, alongside feed-forward networks for knowledge storage. The repository aims to support researchers studying LLM interpretability and hallucination by offering cutting-edge information on Attention Head Mining.
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pytest-evals
pytest-evals is a minimalistic pytest plugin designed to help evaluate the performance of Language Model (LLM) outputs against test cases. It allows users to test and evaluate LLM prompts against multiple cases, track metrics, and integrate easily with pytest, Jupyter notebooks, and CI/CD pipelines. Users can scale up by running tests in parallel with pytest-xdist and asynchronously with pytest-asyncio. The tool focuses on simplifying evaluation processes without the need for complex frameworks, keeping tests and evaluations together, and emphasizing logic over infrastructure.
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fiftyone
FiftyOne is an open-source tool designed for building high-quality datasets and computer vision models. It supercharges machine learning workflows by enabling users to visualize datasets, interpret models faster, and improve efficiency. With FiftyOne, users can explore scenarios, identify failure modes, visualize complex labels, evaluate models, find annotation mistakes, and much more. The tool aims to streamline the process of improving machine learning models by providing a comprehensive set of features for data analysis and model interpretation.
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interpret
InterpretML is an open-source package that incorporates state-of-the-art machine learning interpretability techniques under one roof. With this package, you can train interpretable glassbox models and explain blackbox systems. InterpretML helps you understand your model's global behavior, or understand the reasons behind individual predictions. Interpretability is essential for: - Model debugging - Why did my model make this mistake? - Feature Engineering - How can I improve my model? - Detecting fairness issues - Does my model discriminate? - Human-AI cooperation - How can I understand and trust the model's decisions? - Regulatory compliance - Does my model satisfy legal requirements? - High-risk applications - Healthcare, finance, judicial, ...
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PINNACLE
PINNACLE is a flexible geometric deep learning approach that trains on contextualized protein interaction networks to generate context-aware protein representations. It provides protein representations split across various cell-type contexts from different tissues and organs. The tool can be fine-tuned to study the genomic effects of drugs and nominate promising protein targets and cell-type contexts for further investigation. PINNACLE exemplifies the paradigm of incorporating context-specific effects for studying biological systems, especially the impact of disease and therapeutics.
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cellseg_models.pytorch
cellseg-models.pytorch is a Python library built upon PyTorch for 2D cell/nuclei instance segmentation models. It provides multi-task encoder-decoder architectures and post-processing methods for segmenting cell/nuclei instances. The library offers high-level API to define segmentation models, open-source datasets for training, flexibility to modify model components, sliding window inference, multi-GPU inference, benchmarking utilities, regularization techniques, and example notebooks for training and finetuning models with different backbones.
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aitom
AITom is an open-source platform for AI-driven cellular electron cryo-tomography analysis. It is developed to process large amounts of Cryo-ET data, reconstruct, detect, classify, recover, and spatially model different cellular components using state-of-the-art machine learning approaches. The platform aims to automate cellular structure discovery and provide new insights into molecular biology and medical applications.
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ai-data-analysis-MulitAgent
AI-Driven Research Assistant is an advanced AI-powered system utilizing specialized agents for data analysis, visualization, and report generation. It integrates LangChain, OpenAI's GPT models, and LangGraph for complex research processes. Key features include hypothesis generation, data processing, web search, code generation, and report writing. The system's unique Note Taker agent maintains project state, reducing overhead and improving context retention. System requirements include Python 3.10+ and Jupyter Notebook environment. Installation involves cloning the repository, setting up a Conda virtual environment, installing dependencies, and configuring environment variables. Usage instructions include setting data, running Jupyter Notebook, customizing research tasks, and viewing results. Main components include agents for hypothesis generation, process supervision, visualization, code writing, search, report writing, quality review, and note-taking. Workflow involves hypothesis generation, processing, quality review, and revision. Customization is possible by modifying agent creation and workflow definition. Current issues include OpenAI errors, NoteTaker efficiency, runtime optimization, and refiner improvement. Contributions via pull requests are welcome under the MIT License.
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SynapseML
SynapseML (previously known as MMLSpark) is an open-source library that simplifies the creation of massively scalable machine learning (ML) pipelines. It provides simple, composable, and distributed APIs for various machine learning tasks such as text analytics, vision, anomaly detection, and more. Built on Apache Spark, SynapseML allows seamless integration of models into existing workflows. It supports training and evaluation on single-node, multi-node, and resizable clusters, enabling scalability without resource wastage. Compatible with Python, R, Scala, Java, and .NET, SynapseML abstracts over different data sources for easy experimentation. Requires Scala 2.12, Spark 3.4+, and Python 3.8+.
20 - OpenAI Gpts
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ImageJ Mentor
I assist biological image analysis, including ImageJ macro and Python coding.
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Wowza Bias Detective
I analyze cognitive biases in scenarios and thoughts, providing neutral, educational insights.
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Art Engineer
Analyze and reverse engineer images. Receive style descriptions and image re-creation prompts.
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Stock Market Analyst
I read and analyze annual reports of companies. Just upload the annual report PDF and start asking me questions!
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Good Design Advisor
As a Good Design Advisor, I provide consultation and advice on design topics and analyze designs that are provided through documents or links. I can also generate visual representations myself to illustrate design concepts.
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History Perspectives
I analyze historical events, offering insights from multiple perspectives.
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Automated Knowledge Distillation
For strategic knowledge distillation, upload the document you need to analyze and use !start. ENSURE the uploaded file shows DOCUMENT and NOT PDF. This workflow requires leveraging RAG to operate. Only a small amount of PDFs are supported, convert to txt or doc. For timeout, refresh & !continue
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Art Enthusiast
Analyze any uploaded art piece, providing thoughtful insight on the history of the piece and its maker. Replicate art pieces in new styles generated by the user. Be an overall expert in art and help users navigate the art scene. Inform them of different types of art
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Historical Image Analyzer
A tool for historians to analyze and catalog historical images and documents.
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Phish or No Phish Trainer
Hone your phishing detection skills! Analyze emails, texts, and calls to spot deception. Become a security pro!
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Actor Audition Coach
I analyze audition sides to help actors prepare for in-person and self-taped auditions for TV and Film
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Next.js Helper
A Next.js expert ready to analyze code, answer questions, and offer learning plans.